PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022133588.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

NAC

Protein Properties

Length: 398aa MW: 44574.4 Da PI: 5.2947

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022133588.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	97.4	2.2e-30	55	197	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee.vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tk 79 lp+G++F+Ptdee++ ++L++k+++ + ++++ ++++ +i++++P++Lp v+++ ++ +fF+k++++ya+g+rk+r+ ++ XP_022133588.1 55 LPAGVKFDPTDEEIM-DHLAAKCADGNlkphalIDEFIpTLETDqGICYTHPENLP-GVRKDGNDAHFFHKTSNAYASGQRKRRKietehsssIE 147 799********99.99999996655442222222222236******.6778899****************75666665555 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+k+v++ +g ++g kk++ +y +++ +k+ek++Wv+h+y+l XP_022133588.1 148 HFRWHKTGKNKAVIE-NGVHKGWKKIFSLYrsSKKGSKPEKSNWVIHQYHL 197 778*******9.999*******5434667788*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MGRSWIFDSR TIARKVRNIS QCSSQVIKDC DAKRECPNCH FIIDNTDVSP EWPGLPAGVK 60 FDPTDEEIMD HLAAKCADGN LKPHALIDEF IPTLETDQGI CYTHPENLPG VRKDGNDAHF 120 FHKTSNAYAS GQRKRRKIET EHSSSIEHFR WHKTGKNKAV IENGVHKGWK KIFSLYRSSK 180 KGSKPEKSNW VIHQYHLGTE EDEKEGEYVV SKISYQQPKQ SSKSSDNVLI EDFDATPHRT 240 SPRTPMSNPP VPPRPGKSYS FNAVAANALP QSFAKEEEST PEASHASCPN ISSENDMGYL 300 AWLAGESQDI DDAELHFLED NLLCNEVMDS GAFLSSSQLN QISFPLSNSS TCHEIVNGNV 360 PCGIADLENL ELDTPPDFHL ADLQFGSQES IFDWIDRI

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MGRSWIFDSR TIARKVRNIS QCSSQVIKDC DAKRECPNCH FIIDNTDVSP EWPGLPAGVK  60
FDPTDEEIMD HLAAKCADGN LKPHALIDEF IPTLETDQGI CYTHPENLPG VRKDGNDAHF  120
FHKTSNAYAS GQRKRRKIET EHSSSIEHFR WHKTGKNKAV IENGVHKGWK KIFSLYRSSK  180
KGSKPEKSNW VIHQYHLGTE EDEKEGEYVV SKISYQQPKQ SSKSSDNVLI EDFDATPHRT  240
SPRTPMSNPP VPPRPGKSYS FNAVAANALP QSFAKEEEST PEASHASCPN ISSENDMGYL  300
AWLAGESQDI DDAELHFLED NLLCNEVMDS GAFLSSSQLN QISFPLSNSS TCHEIVNGNV  360
PCGIADLENL ELDTPPDFHL ADLQFGSQES IFDWIDRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14490.1	4e-86	NAC family protein