PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022133397.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | ERF | ||||||||
Protein Properties | Length: 328aa MW: 35892.8 Da PI: 5.4044 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.6 | 1e-20 | 148 | 197 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+WvAeIr p++ r+r +lg+f+taeeAa a+++a+ kl+g XP_022133397.1 148 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRG 197 59******9.**********965...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence |
MAAAIDVYSG ISTPGYSSDP FSEELMKALQ PFMKSVISTS SSSSSSSAYS PASSQPELSP 60 DFCSPSSTRL FSQGFSSIEQ MGLEQSGPIG LNNLTXSQIL QIQAQIQIPP QSMPSFSAAQ 120 ISSQYHNFLA PKSIPMKHVG SPPKPTKLYR GVRQRHWGKW VAEIRLPKNR TRLWLGTFDT 180 AEEAALAYDK AAYKLRGDFA RLNFPHLKHQ FGDFKPLHPS VDAKLQAICQ SLKQGKTEQL 240 CSVADEKLTT PPELELKTEV ETSPSSSSSS SSPSRSEDYS TGSSPESSIS FLDFSDYQWG 300 EGEAFGLEKY PSVEIDWAAL SQLAESEC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39780.1 | 2e-63 | ERF family protein |