PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022133340.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 229aa MW: 25887.5 Da PI: 8.6821 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89.3 | 2.1e-28 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +i+n + rqvtfskRr g++KKA+ELSvLCda+va+iifs tgkl+eyss XP_022133340.1 10 KIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSATGKLFEYSS 59 69**********************************************96 PP | |||||||
2 | K-box | 54.1 | 6.8e-19 | 92 | 171 | 19 | 98 |
K-box 19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++++L+kei + +++R++ Ge+L+ L+++eLqqLe+ Le++l+++ +kK e ++++i++lq+k el eenk+L++ XP_022133340.1 92 SNYTRLNKEIAEKTHQLRQMRGEELQALNIEELQQLEKSLESGLSRVMEKKGERIMKEINDLQRKSAELMEENKRLKQHA 171 6799************************************************************************9975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MAKEKIQIRK IDNATARQVT FSKRRRGLFK KAKELSVLCD ADVALIIFSA TGKLFEYSSS 60 SMKGIIERHH LHSKNLQKLE QPSLELQLVE NSNYTRLNKE IAEKTHQLRQ MRGEELQALN 120 IEELQQLEKS LESGLSRVME KKGERIMKEI NDLQRKSAEL MEENKRLKQH ADKMNGVKHI 180 SVEPENLAVE DGQSSNSITE ACVSNSNGGP PQDLESSDTS LKLGLPYSG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 1e-98 | MIKC_MADS family protein |