PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022133324.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HSF
Protein Properties Length: 299aa    MW: 33167.2 Da    PI: 7.0352
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022133324.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind116.41.8e-36101012102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+y++++d+++++++sw+++g++fvv+++ +fa+++LpkyFkh+nf+SFvRQLn+YgF+k+  ++         weF++++F++g+k+ll+k
  XP_022133324.1  10 FLTKTYQLVDDPATDHVVSWNQTGSTFVVWKTADFATDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDK---------WEFANDNFRRGQKDLLSK 95 
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k+
  XP_022133324.1  96 IRRRKT 101
                     ***985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MAQRSLPAPF LTKTYQLVDD PATDHVVSWN QTGSTFVVWK TADFATDLLP KYFKHNNFSS  60
FVRQLNTYGF RKIVPDKWEF ANDNFRRGQK DLLSKIRRRK TVITPPAQTV HPAKSAGGGN  120
SSASNSGEDI GSTSTSSPDS KNPGSVETGT MAQFADLTEE NEKLRKDNEM LNSELAQTKK  180
QCDELVAFLT DYLKVAPDQI NSIMREGKTR GSANEKCWDG VDPDGDGNNI DDDEEDDVGN  240
GGETLKLFGV WLKGSEKKMK MKMKRLREEK IGCSSAPHAK AMKSVEMHAP LMTSSNLCN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.11e-86HSF family protein