PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022133305.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family B3
Protein Properties Length: 272aa    MW: 31013.2 Da    PI: 9.1222
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022133305.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3505.3e-16651471096
                     HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                      ++++ +++pk+fa+++  ++ +   +++++++g sW++ ++++ ++g+  ++++GWk F+++n Lk gD+  F+++++++f  ++++
  XP_022133305.1  65 GGRLK-MTIPKDFAQNYLPEEVG--RIRIQTLDGGSWSLLYKWSPSRGGfAYISRGWKXFAEENLLKKGDVGFFQMIEKDQF--LFTI 147
                     44554.9*******888433334..7*****************999999899***********************9987777..5555 PP
2B3391.5e-121822631498
                     T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEEEE- CS
              B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvkvfr 98 
                     + l +p  fa++h ++   +   +le    ++W+v++  +++ + + +t+GW  F ++n L++ D+++F+l  ++ s   ++v++f+
  XP_022133305.1 182 STLNIPMGFAKKHLSPVVHG--ARLEV-GQKQWNVRI--KNYEKCMRFTSGWGIFHRENCLQDEDTCIFELLnKNdSHCAFKVTIFK 263
                     4689*********5555555..55554.67*******..88888899***********************76354555556777766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MEPQDQECCI LREKPSCKRI PEDGVSRRRQ PLSSTAENAE KPQRFSGSKS EKPGFRIVIG  60
KSSPGGRLKM TIPKDFAQNY LPEEVGRIRI QTLDGGSWSL LYKWSPSRGG FAYISRGWKX  120
FAEENLLKKG DVGFFQMIEK DQFLFTIEET SASASHSPKN NAATIRNPFF EVDVCFKSYQ  180
CSTLNIPMGF AKKHLSPVVH GARLEVGQKQ WNVRIKNYEK CMRFTSGWGI FHRENCLQDE  240
DTCIFELLNK NDSHCAFKVT IFKKATSSVE EI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.17e-13B3 family protein