PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022133092.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 347aa MW: 38592.5 Da PI: 6.4427

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022133092.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.9	2.3e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv+ ++ +G g+W++ ++ g++R++k+c++rw +yl XP_022133092.1 14 KGPWTPEEDQKLVKHIQTHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	54.9	2.1e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++ +++++ lG++ W++Ia++++ gRt++++k++w+++l XP_022133092.1 67 RGKFSQEEEQTILNLHSVLGNK-WSAIASHLP-GRTDNEIKNFWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MGRSPCCDES GLKKGPWTPE EDQKLVKHIQ THGHGSWRAL PKLAGLNRCG KSCRLRWTNY 60 LRPDIKRGKF SQEEEQTILN LHSVLGNKWS AIASHLPGRT DNEIKNFWNT HLKKKLIQMG 120 FDPMTHRPRT DIFSSLPHII ALASLKELME NPSWEEQALR LQAEAVQMAK FQYLQYLLQP 180 PAASLNNNPS EIEIMNLINS LSSPLLENPI SHSNNNNINL AAATTLQQLG TDSILPFSHL 240 PSLEIPTNVT NRYETVPLNN IPKEMVCGQS DDAANSDPNS PWQLPSSSTD PSPPPPPHLN 300 INDPIASNSN NNYGDACSTS SFAGSSASIW PDHLLLEDVL FHDIPSL

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MGRSPCCDES GLKKGPWTPE EDQKLVKHIQ THGHGSWRAL PKLAGLNRCG KSCRLRWTNY  60
LRPDIKRGKF SQEEEQTILN LHSVLGNKWS AIASHLPGRT DNEIKNFWNT HLKKKLIQMG  120
FDPMTHRPRT DIFSSLPHII ALASLKELME NPSWEEQALR LQAEAVQMAK FQYLQYLLQP  180
PAASLNNNPS EIEIMNLINS LSSPLLENPI SHSNNNNINL AAATTLQQLG TDSILPFSHL  240
PSLEIPTNVT NRYETVPLNN IPKEMVCGQS DDAANSDPNS PWQLPSSSTD PSPPPPPHLN  300
INDPIASNSN NNYGDACSTS SFAGSSASIW PDHLLLEDVL FHDIPSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34670.1	1e-105	MYB family protein