PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022133074.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

AP2

Protein Properties

Length: 514aa MW: 56913.7 Da PI: 6.765

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022133074.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	52.3	1.4e-16	143	192	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_022133074.1 143 SQFRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 192 789****************......55**********************997 PP
2	AP2	43.8	6.5e-14	235	285	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g XP_022133074.1 235 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDKAAIKCNG 285 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence
MWDLNDCPEE RGGDESEAEA EAEACWSPKT SEEKGKRVGW GGSVSNSSSS ALLLEEGSDE 60 EELYGSMEID DPSPGPVTRQ FFPLQDSTAA PPPTTASAFP RAHWVGVKFC HPDPLAAANS 120 IKSTTDLSHP IKKSRRGPRS RSSQFRGVTF YRRTGRWESH IWDCGKQVYL GGFDTAHAAA 180 RAYDRAAIKF RGVEADINFS IEDYEEDLKQ MGNLTKEEFV HVLRRQSTGF PRGSSKYRGV 240 TLHKCGRWEA RMGQFLGKKY VYLGLFDTEI EAARAYDKAA IKCNGKEAVT NFDPSIYDNE 300 LNPTADSIGN LTDHSLDLSL GNSSSKQNDS PNAAVDPHHS SSVPLSMEAE WQRNHHQVFR 360 PPQLNLLQES SGGASKNYNA QRRNNNNTNR YLESETMHLL SQTHIQSPAS FEMQRHGQFS 420 GDQPHSQILL HNHNHNPSLN SLNYQIQFSG SSNRNGGRIG SDLSLSLSDN NQLLQSGPSQ 480 ALATAAASSG FAPQIIPSKN WLQKNGFHCL MRPS

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence

MWDLNDCPEE RGGDESEAEA EAEACWSPKT SEEKGKRVGW GGSVSNSSSS ALLLEEGSDE  60
EELYGSMEID DPSPGPVTRQ FFPLQDSTAA PPPTTASAFP RAHWVGVKFC HPDPLAAANS  120
IKSTTDLSHP IKKSRRGPRS RSSQFRGVTF YRRTGRWESH IWDCGKQVYL GGFDTAHAAA  180
RAYDRAAIKF RGVEADINFS IEDYEEDLKQ MGNLTKEEFV HVLRRQSTGF PRGSSKYRGV  240
TLHKCGRWEA RMGQFLGKKY VYLGLFDTEI EAARAYDKAA IKCNGKEAVT NFDPSIYDNE  300
LNPTADSIGN LTDHSLDLSL GNSSSKQNDS PNAAVDPHHS SSVPLSMEAE WQRNHHQVFR  360
PPQLNLLQES SGGASKNYNA QRRNNNNTNR YLESETMHLL SQTHIQSPAS FEMQRHGQFS  420
GDQPHSQILL HNHNHNPSLN SLNYQIQFSG SSNRNGGRIG SDLSLSLSDN NQLLQSGPSQ  480
ALATAAASSG FAPQIIPSKN WLQKNGFHCL MRPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-120	AP2 family protein