PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022132829.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

NAC

Protein Properties

Length: 469aa MW: 52684.5 Da PI: 4.8962

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022132829.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	153.4	1e-47	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPt elv++yLk+k+ +kkl++ vi+e+diyk+ PwdLp k ++++++ +wyfF++r++kya+g r nrat+ gyWk+tgkd++vl XP_022132829.1 6 LPPGFRFHPTHVELVMFYLKRKIMRKKLPT-GVISELDIYKYAPWDLPdKsCLRSGDLKWYFFCPRERKYASGARMNRATEFGYWKSTGKDRPVL 99 79**************************.99**********96347788889*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg ktL+f++g+apkg +tdWvmheyr+ XP_022132829.1 100 Y-NDQDVGKIKTLTFFRGKAPKGIQTDWVMHEYRI 133 .999***************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MGRRSLPPGF RFHPTHVELV MFYLKRKIMR KKLPTGVISE LDIYKYAPWD LPDKSCLRSG 60 DLKWYFFCPR ERKYASGARM NRATEFGYWK STGKDRPVLY NDQDVGKIKT LTFFRGKAPK 120 GIQTDWVMHE YRIEENNLSL RNVAQDAYVL CVIFQKDGPG PRNGAQYGAP FKEEKWDDDG 180 EEEVEASEVG PSVLSLPLPS KEPQNSFAPD TSATPSNIFD PSSVSCISKN FASTSEEIPP 240 IASGSIAPME IPPLLLDYGE DVFTMQDIFP EDRNLNLDGG DGFQDNKQAT AAASNKTDQN 300 DIFTDLELED VFRLSELNGD GNAEVAGHEL IYNSEQMFPN IKAMFSSGQA PFLELNDLEV 360 PLHSTSEYEH MQMSNLNAAY SCSSANEQPH FPFISFGAAN QHAPSCQYPS LHNSNDQICH 420 PTDHGFPDAH MFASTSTQSP WQQENIHHNS NVGCNGYKAP WRHDHNSNS

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MGRRSLPPGF RFHPTHVELV MFYLKRKIMR KKLPTGVISE LDIYKYAPWD LPDKSCLRSG  60
DLKWYFFCPR ERKYASGARM NRATEFGYWK STGKDRPVLY NDQDVGKIKT LTFFRGKAPK  120
GIQTDWVMHE YRIEENNLSL RNVAQDAYVL CVIFQKDGPG PRNGAQYGAP FKEEKWDDDG  180
EEEVEASEVG PSVLSLPLPS KEPQNSFAPD TSATPSNIFD PSSVSCISKN FASTSEEIPP  240
IASGSIAPME IPPLLLDYGE DVFTMQDIFP EDRNLNLDGG DGFQDNKQAT AAASNKTDQN  300
DIFTDLELED VFRLSELNGD GNAEVAGHEL IYNSEQMFPN IKAMFSSGQA PFLELNDLEV  360
PLHSTSEYEH MQMSNLNAAY SCSSANEQPH FPFISFGAAN QHAPSCQYPS LHNSNDQICH  420
PTDHGFPDAH MFASTSTQSP WQQENIHHNS NVGCNGYKAP WRHDHNSNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09330.3	5e-91	NAC family protein