PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022132608.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB_related
Protein Properties Length: 308aa    MW: 33898.1 Da    PI: 10.218
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022132608.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding353.2e-11555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT+eE+  l+ +v ++G g W+tI            R+  ++k++w++
   XP_022132608.1  5 KQKWTAEEEAALKAGVIKHGAGKWRTILTDPEfssilHQRSNVDLKDKWRN 55
                     79***********************************99***********9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MGAPKQKWTA EEEAALKAGV IKHGAGKWRT ILTDPEFSSI LHQRSNVDLK DKWRNINVTA  60
IWGSRQKAKL ALKKNSLALK HHDNSMAVST VLQNEEIVDA KPLAVSNGTT RTNGPKEPLA  120
RLDKLISEAI NNLKEPRGSD RAAIAMYIEE HYWAPPNLKK LLSTKLKHMT ANGRLIKVKH  180
KYRIAPTSAL SGKRNVPLLL LEGKQMDSSK AEKGEVKIIT KFQVDSELSK MKVMTAEEAA  240
IAAARAVAEA EAAIAEAERA AKEAEEAEAE AESAQVFAEA AMKALECRTF PTRSPIQKVL  300
LQDNKTLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.14e-74MYB_related family protein