PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022132592.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family B3
Protein Properties Length: 409aa    MW: 46936.6 Da    PI: 10.0606
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022132592.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.13.7e-141751796
                    E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96
                    ++p kf+ee+g+    s  ++l+ ++g++W+v l  + + ++ ++l++GW  F++  +Lk g ++v++ld++s+f     +
  XP_022132592.1  1 MIPQKFVEEYGKF--LSSSVRLKLPDGKEWKVGL--KATTNGaVWLQNGWHPFAEHYRLKHGSMLVLRLDENSTF--QTLI 75
                    69********855..7778***************..4444444**************************998888..5555 PP
2B355.97.5e-18185274190
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                     f+ v+ +s+v+ + +l++pk+fae++  + e +  +++++++g++W + +++++++     ++++GWk F+++n Lk+gD+  F+l+++ +f
  XP_022132592.1 185 FKVVMGKSNVGGRFNLIIPKEFAEKYLAE-EFG-IIRVQNSNGKTWPLLYKWTRSRAYafSYISSGWKCFAEENLLKVGDVGFFQLIENGRF 274
                     66778899******************544.343.8***************98777665778899**********************987776 PP
3B354.81.7e-17302397199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..E CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelv 93 
                     ffkv ++  + +s  l +p  f ++h  + +++   ++  + g++W+v +  +++++ + +++GW +F ++n L++gD+++F+l  ++ s f ++
  XP_022132592.1 302 FFKVDIHFVSYRSTVLNIPMGFGKKHI-P-PGT-HTVMLKLGGKKWKVSM--KNYDRCFRFSAGWCSFYRDNALQDGDTCLFELLnKNhSHFVFK 391
                     6777777777888899*******9994.3.333.4666789*********..***999*************************65488899*999 PP

                     EEEE-S CS
              B3  94 vkvfrk 99 
                     v++frk
  XP_022132592.1 392 VTIFRK 397
                     999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 409 aa     Download sequence    
MIPQKFVEEY GKFLSSSVRL KLPDGKEWKV GLKATTNGAV WLQNGWHPFA EHYRLKHGSM  60
LVLRLDENST FQTLIFEPSG SEIEYSFKFN DFGGDFQEES DDDSDESFEI FHQHSKKREK  120
PSLPSSQSRK KMRSEGSFSP KMVPQEGRHI SREKPSCKRM AQNGVSNRRQ PLSSPAKKAE  180
KKPGFKVVMG KSNVGGRFNL IIPKEFAEKY LAEEFGIIRV QNSNGKTWPL LYKWTRSRAY  240
AFSYISSGWK CFAEENLLKV GDVGFFQLIE NGRFLFTTEE TSPSTSPSLS PKKEAETATN  300
PFFKVDIHFV SYRSTVLNIP MGFGKKHIPP GTHTVMLKLG GKKWKVSMKN YDRCFRFSAG  360
WCSFYRDNAL QDGDTCLFEL LNKNHSHFVF KVTIFRKITA SVENVLEIW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-16B3 family protein