PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022132347.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | YABBY | ||||||||
Protein Properties | Length: 183aa MW: 20363.3 Da PI: 5.9235 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 185.1 | 3.6e-57 | 6 | 170 | 2 | 167 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakas....qllaaeshldeslkeelleelkveeenlksnvekeesa 92 d+ +sse++ yvqC+ C+til+v+vP++ l++vv vrCG Ct llsvn+a+ s ll++ l+++l ++l+ + ++ +n++s ++++++ XP_022132347.1 6 DLLDSSEEIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAMPSfipfDLLTS---LSHNLPKQLAFGQDFDLNNVTSDLIASNHN 97 56789*********************************************998544444454...455777778888888888888888877776 PP YABBY 93 stsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkih 167 + + + ++p +p v++PPek+qr+Psayn+fikeei+r+ka+nP ++h+eaf +aaknWah+P++h XP_022132347.1 98 IIQDHED--DPDLIINIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPAH 170 6555442..4566778888899****************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
MSTVEDLLDS SEEIRYVQCG LCSTILLVNV PYSNLSMVVS VRCGNCTGLL SVNMAMPSFI 60 PFDLLTSLSH NLPKQLAFGQ DFDLNNVTSD LIASNHNIIQ DHEDDPDLII NIPPTPVVNK 120 PPEKKQRAPS AYNQFIKEEI RRLKAENPAM AHKEAFKTAA KNWAHLPPAH GEEGDQMRKK 180 IVV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G23420.1 | 1e-52 | YABBY family protein |