PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022132007.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 225aa MW: 26210.8 Da PI: 9.5791 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 96.1 | 1.5e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskR++g+lKKA+E+SvLCdaeva+i+fs++gkl+ey++ XP_022132007.1 9 KRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALILFSHKGKLFEYAT 59 79***********************************************86 PP | |||||||
2 | K-box | 101.3 | 1.3e-33 | 87 | 176 | 11 | 100 |
K-box 11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 e +e+++ e+ +Lk+++e Lqr++ h++GedL+sLs+keLq+Leqq++++lk+iRs+Kn+l++++i+ lq+ke+++qe+n L k+++e XP_022132007.1 87 EFSQENWTLEYYRLKSKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHIRSRKNQLMYDSISALQRKERAIQEQNALLAKQIKE 176 45689**********************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MGRGRVQLKR IENKINRQVT FSKRKAGLLK KAHEISVLCD AEVALILFSH KGKLFEYATD 60 SSMEKILERY ERYSYVGRQQ IALSETEFSQ ENWTLEYYRL KSKVELLQRN NSHYMGEDLD 120 SLSVKELQNL EQQIDTALKH IRSRKNQLMY DSISALQRKE RAIQEQNALL AKQIKEKEKS 180 VAMAQQAEWE HQQQQHHGYS ALSFLFPTPP HPSLNIGLAS FEGNQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 6e-99 | MIKC_MADS family protein |