PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022131965.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 228aa MW: 25362.1 Da PI: 7.8781 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 83.5 | 1.3e-26 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g++KKAeEL vLCda+va++ifs tgkl+eyss XP_022131965.1 9 KKIDNLTARQVTFSKRRRGLMKKAEELAVLCDADVALLIFSATGKLFEYSS 59 68***********************************************96 PP | |||||||
2 | K-box | 42.7 | 2.5e-15 | 98 | 170 | 26 | 98 |
K-box 26 keienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 k + +++R++ GedL+ L+l++L+qLe+ Le +l ++ +K++ ++++i+ l k +l een++L++k+ XP_022131965.1 98 KDVADKSHQLRQMRGEDLQGLNLEDLKQLERVLEVGLARVLHTKEQKIMSEISALELKGARLMEENRKLKQKM 170 5555556789*************************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MAREKIKIKK IDNLTARQVT FSKRRRGLMK KAEELAVLCD ADVALLIFSA TGKLFEYSSS 60 SIKDVIGRYN LHSNNIGKLE YPSLELQLEN SNHVRLCKDV ADKSHQLRQM RGEDLQGLNL 120 EDLKQLERVL EVGLARVLHT KEQKIMSEIS ALELKGARLM EENRKLKQKM LRLSNERIPV 180 LADSDVGIPE EGGVSSESAA NVCSCNSGPP ADEDSSDTSL KLGLPCSN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 1e-83 | MIKC_MADS family protein |