PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022131736.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Trihelix

Protein Properties

Length: 384aa MW: 44139.3 Da PI: 6.6199

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022131736.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	87.5	1.5e-27	75	156	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e++ Li +rrem+ ++++k++k+lWe++s+kmrergf rsp++C++kw+nl k++kk k+++++ s +++y++++e XP_022131736.1 75 WVQDETRSLISLRREMDGLFNTSKSNKHLWEQISSKMRERGFDRSPTMCTDKWRNLLKEFKKAKHHDRGS---GSAKMSYYKEIE 156 ******************************************************************84...556899*997 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MYLPDKPRPI DIYKEEGSRD MMIEVASNGD HHLPPHQHQQ QQQQQQTHPQ HQLMLGDSSG 60 EDHEVKAPKK RAETWVQDET RSLISLRREM DGLFNTSKSN KHLWEQISSK MRERGFDRSP 120 TMCTDKWRNL LKEFKKAKHH DRGSGSAKMS YYKEIEEILK ERSKSAHYKS PTPPKIDSYM 180 QFSDKGIEDN GLSFGPVEAG GRPSLNLERQ LDHDGHPLAI TAADAVAATG IPPWNWREAP 240 GNGGESQAFG GRVISVKWGD YTRRIGIDGT SDAIKEAIKS AFRLRTKRAF WLEDEDQVVR 300 SLDRDMPLGN YTLHLDEGLA VKICLYDESD HLPVHTEDKI FYVEDDYREF LARRGWTCLR 360 EFDGYRNIDN MDDLRPGAIY RGVS

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MYLPDKPRPI DIYKEEGSRD MMIEVASNGD HHLPPHQHQQ QQQQQQTHPQ HQLMLGDSSG  60
EDHEVKAPKK RAETWVQDET RSLISLRREM DGLFNTSKSN KHLWEQISSK MRERGFDRSP  120
TMCTDKWRNL LKEFKKAKHH DRGSGSAKMS YYKEIEEILK ERSKSAHYKS PTPPKIDSYM  180
QFSDKGIEDN GLSFGPVEAG GRPSLNLERQ LDHDGHPLAI TAADAVAATG IPPWNWREAP  240
GNGGESQAFG GRVISVKWGD YTRRIGIDGT SDAIKEAIKS AFRLRTKRAF WLEDEDQVVR  300
SLDRDMPLGN YTLHLDEGLA VKICLYDESD HLPVHTEDKI FYVEDDYREF LARRGWTCLR  360
EFDGYRNIDN MDDLRPGAIY RGVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.1	0.0	Trihelix family protein