PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022131292.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

AP2

Protein Properties

Length: 669aa MW: 73278.9 Da PI: 7.5192

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022131292.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.9	3.8e-16	287	346	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022131292.1 287 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 346 78*****************988886678446***********************98 PP
2	AP2	45.9	1.4e-14	389	440	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s ++GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022131292.1 389 SVFRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 440 689*************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 669 aa Download sequence
MKSRNENNSN NNNNNNSWLG FSLSPHMKME LTTPSDPHTH SYNNSSSAAA PPHPHTPTSF 60 YLSPHFNNSS EFFYPQNPNP PSLSVMPLKS DGSLCIMEAL SRSQTQGMAP KLEDFLGGRG 120 YFNQNAESEP EREHSLNRHQ NQDHHILIHN SHHYYPGLVP NSVAAIGSCH PQIPQIPSED 180 DEIPCLTNWV SRPHFNNHHH PLVDHHIAAG VNDGAGMTCG DLQSLSLSMS PGSQSTSFPA 240 SGQISPTGVD ASAAASAVET KKRGPGKLCQ KQPVHRKSID TFGQRTSQYR GVTRHRWTGR 300 YEAHLWDNSC KKEGQTRKGR QVYLGGYDME EKAARAYDLA ALKYWGPSTH INFPLENYQT 360 ELEEMKNMSR QEYVAHLRRK SSGFSRGASV FRGVTRHHQH GRWQARIGRV AGNKDLYLGT 420 FSTQEEAAEA YDIAAIKFRG VNAVTNFDIS RYDVDRIMAS NTLLAGDLAR RNKQIEPGNE 480 AAAAPAPLGF DSSTTQNNNA GINPDEASNG ANGNGSTDWK MALYQNQQQQ QAATCVAESL 540 DHHKSSMTAA SGSYRNASFS MALQDLIGIE SMNSNNNNSH GIDDDVGCKQ VTHFSNSSSL 600 VTSLSSSREG SPDKTNVSMP FAKPPPLMAS KLIGAATSGV GSWYPSPPQL RPTAISMAHL 660 PVFAAWNDT

Sequence ? help Back to Top

Protein Sequence Length: 669 aa Download sequence

MKSRNENNSN NNNNNNSWLG FSLSPHMKME LTTPSDPHTH SYNNSSSAAA PPHPHTPTSF  60
YLSPHFNNSS EFFYPQNPNP PSLSVMPLKS DGSLCIMEAL SRSQTQGMAP KLEDFLGGRG  120
YFNQNAESEP EREHSLNRHQ NQDHHILIHN SHHYYPGLVP NSVAAIGSCH PQIPQIPSED  180
DEIPCLTNWV SRPHFNNHHH PLVDHHIAAG VNDGAGMTCG DLQSLSLSMS PGSQSTSFPA  240
SGQISPTGVD ASAAASAVET KKRGPGKLCQ KQPVHRKSID TFGQRTSQYR GVTRHRWTGR  300
YEAHLWDNSC KKEGQTRKGR QVYLGGYDME EKAARAYDLA ALKYWGPSTH INFPLENYQT  360
ELEEMKNMSR QEYVAHLRRK SSGFSRGASV FRGVTRHHQH GRWQARIGRV AGNKDLYLGT  420
FSTQEEAAEA YDIAAIKFRG VNAVTNFDIS RYDVDRIMAS NTLLAGDLAR RNKQIEPGNE  480
AAAAPAPLGF DSSTTQNNNA GINPDEASNG ANGNGSTDWK MALYQNQQQQ QAATCVAESL  540
DHHKSSMTAA SGSYRNASFS MALQDLIGIE SMNSNNNNSH GIDDDVGCKQ VTHFSNSSSL  600
VTSLSSSREG SPDKTNVSMP FAKPPPLMAS KLIGAATSGV GSWYPSPPQL RPTAISMAHL  660
PVFAAWNDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-142	AP2 family protein