PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022131259.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MIKC_MADS
Protein Properties Length: 202aa    MW: 22695.8 Da    PI: 8.9565
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022131259.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF95.91.8e-30959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien++ rqvtfskRrng+lKKA+ELSvLCda+v+v+ifs++g+lye+ss
  XP_022131259.1  9 KRIENSTSRQVTFSKRRNGLLKKAYELSVLCDAQVSVLIFSQKGRLYEFSS 59
                    79***********************************************96 PP

2K-box57.46.1e-2080155882
           K-box   8 s.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqk 82 
                     +  +e  +++l+qe++   k+ie L+++q +llG +L+s+slkeL+++e+qLe sl++iR++K +ll+e+  +l  
  XP_022131259.1  80 AfRSEGYMQQLKQEAEMTAKKIEHLENSQQKLLGRGLDSCSLKELREIERQLELSLSRIRERKGKLLTEENAKLSA 155
                     34677789*************************************************************9888765 PP

Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MVRGKVEMKR IENSTSRQVT FSKRRNGLLK KAYELSVLCD AQVSVLIFSQ KGRLYEFSSS  60
DMQKSIERYH KYGKDGQTNA FRSEGYMQQL KQEAEMTAKK IEHLENSQQK LLGRGLDSCS  120
LKELREIERQ LELSLSRIRE RKGKLLTEEN AKLSAKCGAE PWQAEEGGGG GDAEGGIVGL  180
CSQSSKSNSD MQTELFIGLP CM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62165.42e-72MIKC_MADS family protein