PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022131259.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 202aa MW: 22695.8 Da PI: 8.9565 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 95.9 | 1.8e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++ rqvtfskRrng+lKKA+ELSvLCda+v+v+ifs++g+lye+ss XP_022131259.1 9 KRIENSTSRQVTFSKRRNGLLKKAYELSVLCDAQVSVLIFSQKGRLYEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 57.4 | 6.1e-20 | 80 | 155 | 8 | 82 |
K-box 8 s.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqk 82 + +e +++l+qe++ k+ie L+++q +llG +L+s+slkeL+++e+qLe sl++iR++K +ll+e+ +l XP_022131259.1 80 AfRSEGYMQQLKQEAEMTAKKIEHLENSQQKLLGRGLDSCSLKELREIERQLELSLSRIRERKGKLLTEENAKLSA 155 34677789*************************************************************9888765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MVRGKVEMKR IENSTSRQVT FSKRRNGLLK KAYELSVLCD AQVSVLIFSQ KGRLYEFSSS 60 DMQKSIERYH KYGKDGQTNA FRSEGYMQQL KQEAEMTAKK IEHLENSQQK LLGRGLDSCS 120 LKELREIERQ LELSLSRIRE RKGKLLTEEN AKLSAKCGAE PWQAEEGGGG GDAEGGIVGL 180 CSQSSKSNSD MQTELFIGLP CM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62165.4 | 2e-72 | MIKC_MADS family protein |