PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022131258.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 216aa MW: 24425.9 Da PI: 9.1788 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 95.7 | 2e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++ rqvtfskRrng+lKKA+ELSvLCda+v+v+ifs++g+lye+ss XP_022131258.1 9 KRIENSTSRQVTFSKRRNGLLKKAYELSVLCDAQVSVLIFSQKGRLYEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 66.7 | 7.8e-23 | 82 | 171 | 9 | 98 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +e +++l+qe++ k+ie L+++q +llG +L+s+slkeL+++e+qLe sl++iR++K++l++eq e+l +k k l een +L++k XP_022131258.1 82 RSEGYMQQLKQEAEMTAKKIEHLENSQQKLLGRGLDSCSLKELREIERQLELSLSRIRERKSQLFKEQKEKLIEKGKLLTEENAKLSAKC 171 677789********************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MVRGKVEMKR IENSTSRQVT FSKRRNGLLK KAYELSVLCD AQVSVLIFSQ KGRLYEFSSS 60 DMQKSIERYH KYGKDGQTNA FRSEGYMQQL KQEAEMTAKK IEHLENSQQK LLGRGLDSCS 120 LKELREIERQ LELSLSRIRE RKSQLFKEQK EKLIEKGKLL TEENAKLSAK CGAEPWQAEE 180 GGGGGDAEGG IVGLCSQSSK SNSDMQTELF IGLPCM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62165.3 | 6e-78 | MIKC_MADS family protein |