PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022131252.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB
Protein Properties Length: 300aa    MW: 33656.7 Da    PI: 5.6851
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022131252.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.71.3e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEde+l+d+v+  G g+W++ ++  g++R++k+c++rw +yl
   XP_022131252.1 14 KGPWTAEEDEKLIDYVANNGHGSWRALPKLAGLNRCGKSCRLRWTNYL 61
                     79********************************************97 PP
2Myb_DNA-binding53.65.3e-1767112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++++eE+  +++++  lG++ W++Ia++++ gRt++++k++w+++l
   XP_022131252.1  67 RGKFSPEEEASIIKLHSFLGNR-WSRIASHLP-GRTDNEIKNFWNTHL 112
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MGRSPCCDEN GVKKGPWTAE EDEKLIDYVA NNGHGSWRAL PKLAGLNRCG KSCRLRWTNY  60
LRPDIKRGKF SPEEEASIIK LHSFLGNRWS RIASHLPGRT DNEIKNFWNT HLRKKLLQMG  120
IDPNTHKPRT DLNPFLNISQ LFNGITSPLN SDHLKLQAEI AKLQLLQNLC QLLNTPTIIP  180
YVANSAMDGL QNPNPNPNQF QAGFSTGFVS VPGFEDGRKN KAELEERCDY VQVEETENYY  240
PVLPPLISES PGSASNVNQI ESEISNSPAA DSSIFDSLES LMNDEEANGS YWNDILRSTI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34670.14e-83MYB family protein