PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW22039
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family MYB
Protein Properties Length: 339aa    MW: 38221 Da    PI: 6.5487
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW22039genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.72.6e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg W++eEde+l+++++ +G g+W+t+++  g+ R++k+c++rw +yl
         OIW22039 14 RGLWSPEEDEKLINYITTYGHGCWSTVPKLAGLQRCGKSCRLRWINYL 61
                     788*******************************************97 PP
2Myb_DNA-binding47.83.2e-1567109145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      rg+++++E  l+++++  lG++ W+ Ia++++ gRt++++k++w+
         OIW22039  67 RGSFSAQEATLIIELHSILGNR-WAQIAKHLP-GRTDNEVKNFWN 109
                      899*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MGHHSCCNKQ KVKRGLWSPE EDEKLINYIT TYGHGCWSTV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGSF SAQEATLIIE LHSILGNRWA QIAKHLPGRT DNEVKNFWNS SIKKKLLSHD  120
VVPSLSTFSG NGSVESFYPL STENPILNSH HHYHHLDQLY LPIPSPILQG NCDHNDIKLD  180
INNYNTNFLH IQNPMPQTVS SNNPSFFEDS WSLGSVPVHL NPNQELQITK SDVEKLISPS  240
TLQHYDLVEP NLTVPKVCDS IEDYVCSIPY NSSASLEQHE ALARIQCYTP SICPQDDQTL  300
VETNHVEYID AFIMSSLASS TTSSSIVAKT IIPSSFEYS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13890.23e-80MYB family protein