PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW21774

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

AP2

Protein Properties

Length: 695aa MW: 76730.6 Da PI: 6.618

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW21774	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	32.1	2.9e-10	271	327	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +e+Aa+ ++ a++k++g OIW21774 271 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQTrKGRQ-GGYDKEEKAARSYDLAALKYWG 327 57*****************4444.2455535555.779999************98 PP
2	AP2	50.8	4.1e-16	370	421	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+fgt eeAa+a++ a+ k++g OIW21774 370 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFGTQEEAAEAYDIAAIKFRG 421 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 695 aa Download sequence
MASMNLLGFS LSPQEQHVDA TQEHSQSTAT RFGFNPNGIS STDVSEDCFD ITSHHSTAHS 60 LNLPPFGIYE AFNRNSINTS QDWKENYCNQ NLLLGTSGSN QNLDTNLQHP KLENFLGGHT 120 FEGNSATGDY LFSSCSLQLP PQPAEASAAG SGGGGNSIGL SMIKTWLRNQ PPQPDNNNNN 180 KNNNTNDSNG VSATPCAAPS GTRANSVQTL SLSMSTGSQS QLNMVNVGAG KSCSSDNKKP 240 SMASTMTLDT QTESIETVPR KSIDTFGQRT SIYRGVTRHR WTGRYEAHLW DNSCRREGQT 300 RKGRQGGYDK EEKAARSYDL AALKYWGSTT TTNFPISNYE KELEEMKHMT RQEYVASLRR 360 KSSGFSRGAS IYRGVTRHHQ HGRWQARIGR VAGNKDLYLG TFGTQEEAAE AYDIAAIKFR 420 GLNAVTNFDM NRYDVKSILD STTLPIGAAA KRLKDMEQVD FITMDSHSHS HSHRSSTDEA 480 SNININSITS HLTDQGIVNN SYGASAWPTS LASFQQQPNH MQHYLYNGQR LWCKQEQDHF 540 SSSNDHASHN FHDLQYQLQL GNNNTHNFFQ ANNDSGLHSI MCLDSTTSID NGYGDGGGGY 600 MIPMGTIADD GNHNQRNNSF GDDNEVKRLA NYESVYGSSD DDPYHARNLY YLPQQQSSVD 660 QGSACNTWVP TSIPTRPSNM ALFHGASSPF TILHE

Sequence ? help Back to Top

Protein Sequence Length: 695 aa Download sequence

MASMNLLGFS LSPQEQHVDA TQEHSQSTAT RFGFNPNGIS STDVSEDCFD ITSHHSTAHS  60
LNLPPFGIYE AFNRNSINTS QDWKENYCNQ NLLLGTSGSN QNLDTNLQHP KLENFLGGHT  120
FEGNSATGDY LFSSCSLQLP PQPAEASAAG SGGGGNSIGL SMIKTWLRNQ PPQPDNNNNN  180
KNNNTNDSNG VSATPCAAPS GTRANSVQTL SLSMSTGSQS QLNMVNVGAG KSCSSDNKKP  240
SMASTMTLDT QTESIETVPR KSIDTFGQRT SIYRGVTRHR WTGRYEAHLW DNSCRREGQT  300
RKGRQGGYDK EEKAARSYDL AALKYWGSTT TTNFPISNYE KELEEMKHMT RQEYVASLRR  360
KSSGFSRGAS IYRGVTRHHQ HGRWQARIGR VAGNKDLYLG TFGTQEEAAE AYDIAAIKFR  420
GLNAVTNFDM NRYDVKSILD STTLPIGAAA KRLKDMEQVD FITMDSHSHS HSHRSSTDEA  480
SNININSITS HLTDQGIVNN SYGASAWPTS LASFQQQPNH MQHYLYNGQR LWCKQEQDHF  540
SSSNDHASHN FHDLQYQLQL GNNNTHNFFQ ANNDSGLHSI MCLDSTTSID NGYGDGGGGY  600
MIPMGTIADD GNHNQRNNSF GDDNEVKRLA NYESVYGSSD DDPYHARNLY YLPQQQSSVD  660
QGSACNTWVP TSIPTRPSNM ALFHGASSPF TILHE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17430.1	1e-125	AP2 family protein

Link Out ? help Back to Top
Ensembl	OIW21774