PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW21667
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family GRAS
Protein Properties Length: 542aa    MW: 60984.1 Da    PI: 5.7289
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW21667genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS447.11.2e-1361725421374
      GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
               l+e L++cA+a++ +d+e +++l+++l++++s +g+p+qRl ay++eAL a++a+s+s++ykal+++e +     e l+++++++e++P++kf+++ aN a
  OIW21667 172 LKEMLYTCANAMAGNDMETTEWLMSELRKMVSISGKPIQRLGAYVLEALVAKMASSGSTIYKALKCKEPT---GNELLSYMHVLYEICPYFKFGYMSANGA 269
               5789*****************************************************************9...99************************** PP

      GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgE 200
               I ea+++e+rvHiiDf+i+qG QW++L+qaLa+Rp+gpp++RiTgv+++ s   +   l  +g+rL+ +A++++vpfef++ v  + ++++l++L+++p+E
  OIW21667 270 IAEAMKHESRVHIIDFQIGQGSQWVSLIQALANRPGGPPKIRITGVDDSVSAyaRGGGLDIVGKRLSTLAQSCNVPFEFEA-VRVSASEVQLKDLELRPDE 369
               ************************************************888899999************************.68899************** PP

      GRAS 201 alaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvace 301
               a+aVn++++lh+++de+v+++++rd++L+l k+lsPkvv++veqe ++n+ +Fl rf+e+l+yy a+f+sl++ lpre++eri+vE+++l+re+vn++ace
  OIW21667 370 AVAVNFAIMLHHMPDETVNSQNHRDRLLRLAKNLSPKVVTLVEQEFNTNHVPFLPRFIETLNYYLAIFESLDVVLPREHKERINVEQHCLAREVVNLIACE 470
               ***************************************************************************************************** PP

      GRAS 302 gaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
               g er+erhe l+kWr+r+++aGF+p+pls+++++++k ll+ +k++ y++ee++g+l+lgW+++ Lv+ +aWr
  OIW21667 471 GVERVERHELLNKWRMRFTMAGFTPYPLSSFVNSSIKNLLESYKGH-YTLEERDGALYLGWMNQVLVASCAWR 542
               ********************************************77.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 542 aa     Download sequence    
MQTSQKHGTS YGSGRFYVEP VQNLESYCLP SSENLDNYSS SDNSSRATYP SVQTFEHSCT  60
LESSSTSNNF LCQNYPSTAS FSPNSSPVSK SYVSRPQHSL EIINGSPEND SCLTHDLDDL  120
RHKIRELETA LLGPDADMLD IYGAIVPEES DSFFLQTEKW KQITEMISRG DLKEMLYTCA  180
NAMAGNDMET TEWLMSELRK MVSISGKPIQ RLGAYVLEAL VAKMASSGST IYKALKCKEP  240
TGNELLSYMH VLYEICPYFK FGYMSANGAI AEAMKHESRV HIIDFQIGQG SQWVSLIQAL  300
ANRPGGPPKI RITGVDDSVS AYARGGGLDI VGKRLSTLAQ SCNVPFEFEA VRVSASEVQL  360
KDLELRPDEA VAVNFAIMLH HMPDETVNSQ NHRDRLLRLA KNLSPKVVTL VEQEFNTNHV  420
PFLPRFIETL NYYLAIFESL DVVLPREHKE RINVEQHCLA REVVNLIACE GVERVERHEL  480
LNKWRMRFTM AGFTPYPLSS FVNSSIKNLL ESYKGHYTLE ERDGALYLGW MNQVLVASCA  540
WR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein