PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW21530 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | YABBY | ||||||||
Protein Properties | Length: 154aa MW: 17162.6 Da PI: 9.705 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 88 | 2.5e-27 | 10 | 129 | 2 | 135 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssekls 102 d++ s+++Cyv+CnfCnt+lav +P + l+ +vtv+CGhC++l l+++ + ++ +d++l +++ +++ k +++s+s ss + OIW21530 10 DLVPPSDHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSF--LSTRPPYSPQNQTIDHTL-----TLQGFYGDSK-----KGRASSSSSSS---T 95 78899*************************************9855..444444444444433332.....2222222221.....12222222222...2 PP YABBY 103 enedeevprvpp.virPPekrqrvPsaynrfike 135 ++++ +p++ p v++PPek+ r Psaynrf+k+ OIW21530 96 TSNESVSPKAAPfVVKPPEKKHRLPSAYNRFMKN 129 3445566776666*******************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 154 aa Download sequence |
MNHEEKVTMD LVPPSDHLCY VRCNFCNTVL AVGIPCKRLL DTVTVKCGHC SNLSFLSTRP 60 PYSPQNQTID HTLTLQGFYG DSKKGRASSS SSSSTTSNES VSPKAAPFVV KPPEKKHRLP 120 SAYNRFMKNK KICGKGDVGR DWKNAIMHHY LSFN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69180.1 | 3e-39 | YABBY family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW21530 |