PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW21176

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

CO-like

Protein Properties

Length: 427aa MW: 48186 Da PI: 5.0143

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW21176	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	30	1.1e-09	20	63	3	40
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 +r C+ + k+++++C ++ +lCe C +++H+ H++v OIW21176 20 ARACDSCITKRARWYCAADDAFLCEACDSSIHSAnqlarkHERV 63 578*****************************667888888876 PP
2	CCT	71.1	2.8e-24	373	416	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea+llRY+eKr+tR+F+KkirYe+RK +Ae+RpR+KGrFvk+a OIW21176 373 REARLLRYREKRQTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRA 416 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MNTASASAKN VANSVGGKTA RACDSCITKR ARWYCAADDA FLCEACDSSI HSANQLARKH 60 ERVRLKITSC NSSNTKETIN YDAPMWHKGF TKKARTPRQK AKNPFHLVPE VDHLDDANSN 120 EESDEKLLYR VPILDPLAAE LCTTPSSVAV VEALEVETSF TKGEEGKASL GYKNYGVESL 180 HGFISLDTEL EEFAADVESL LGNGLENECN IGMEELGLID RKEENCNSWE NSEKVKVKEE 240 EKVDQMEIGR EREPLELCFD YDIDDDRDES PMTNEEVEEK VDLDFTKDVM NGGELKENEQ 300 EKRNALLQLD YEGVITAWAS QKSPWVNGDK PNFESDQCWP HCMGSCGMQL HHQPYGELGG 360 LFGGHAAMAE GGREARLLRY REKRQTRLFS KKIRYEVRKL NAEKRPRMKG RFVKRASFAP 420 PPTFPLL

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MNTASASAKN VANSVGGKTA RACDSCITKR ARWYCAADDA FLCEACDSSI HSANQLARKH  60
ERVRLKITSC NSSNTKETIN YDAPMWHKGF TKKARTPRQK AKNPFHLVPE VDHLDDANSN  120
EESDEKLLYR VPILDPLAAE LCTTPSSVAV VEALEVETSF TKGEEGKASL GYKNYGVESL  180
HGFISLDTEL EEFAADVESL LGNGLENECN IGMEELGLID RKEENCNSWE NSEKVKVKEE  240
EKVDQMEIGR EREPLELCFD YDIDDDRDES PMTNEEVEEK VDLDFTKDVM NGGELKENEQ  300
EKRNALLQLD YEGVITAWAS QKSPWVNGDK PNFESDQCWP HCMGSCGMQL HHQPYGELGG  360
LFGGHAAMAE GGREARLLRY REKRQTRLFS KKIRYEVRKL NAEKRPRMKG RFVKRASFAP  420
PPTFPLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25440.1	4e-94	CO-like family protein

Link Out ? help Back to Top
Ensembl	OIW21176