PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW21163

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 417aa MW: 45768.6 Da PI: 6.0981

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW21163	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.1	8.7e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++++G g+W++ +++ g+ R++k+c++rw +yl OIW21163 14 KGPWTPEEDQKLLAYIEEHGHGSWRALPSKAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	49.7	8.4e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia ++ +Rt++++k++w+++l OIW21163 67 RGKFSLQEEQTIIQLHALLGNR-WSAIATHLS-KRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MGRSPCCDKV GLKKGPWTPE EDQKLLAYIE EHGHGSWRAL PSKAGLQRCG KSCRLRWTNY 60 LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLSKRT DNEIKNYWNT HLKKRLTKMG 120 IDPITHKPKN DALLSSDGQS KTAANLSHMA QWESARLEAE ARLVRESKLR SHSLQNQLGS 180 STFASSSSAS TSLLNNNKQE AASTTEMVPI QSRSIDVLKA WNNGGWLKSN EVSNGVGDLE 240 SPTSTLSFSE NAPPIMTTTT TNSGSGGILG ENTMPMIEFV GSSSGCSVKE EGEQEWKGYE 300 SSNNLAEYKD GIMENSVNTF TCGLHELTMS MEGAATWPGS HESLRTNDHA IVEEGFINLL 360 LNTNSGNHRS LSECGGDSNN DEGSGNGSDG DFYEDNKNYW NSILNLVNSS PSDSPMF

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MGRSPCCDKV GLKKGPWTPE EDQKLLAYIE EHGHGSWRAL PSKAGLQRCG KSCRLRWTNY  60
LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLSKRT DNEIKNYWNT HLKKRLTKMG  120
IDPITHKPKN DALLSSDGQS KTAANLSHMA QWESARLEAE ARLVRESKLR SHSLQNQLGS  180
STFASSSSAS TSLLNNNKQE AASTTEMVPI QSRSIDVLKA WNNGGWLKSN EVSNGVGDLE  240
SPTSTLSFSE NAPPIMTTTT TNSGSGGILG ENTMPMIEFV GSSSGCSVKE EGEQEWKGYE  300
SSNNLAEYKD GIMENSVNTF TCGLHELTMS MEGAATWPGS HESLRTNDHA IVEEGFINLL  360
LNTNSGNHRS LSECGGDSNN DEGSGNGSDG DFYEDNKNYW NSILNLVNSS PSDSPMF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	1e-126	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW21163