PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW21128

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 640aa MW: 68266.7 Da PI: 5.508

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW21128	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	53.2	8.7e-17	539	588	51	100
DUF260 51 eeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 e++r+da++s+vyeA+ar+rdPvyG+vg i++lqqq++ l+++lal+++e OIW21128 539 EQQRSDAVKSMVYEANARVRDPVYGCVGAISSLQQQVDVLQTQLALAQAE 588 678******************************************99976 PP

Sequence ? help Back to Top
Protein Sequence Length: 640 aa Download sequence
MAPLPSTVFP LPAASPSLLK PHAGKKNLSS FSPILNAYKA SSSRGVVARG SSTKSFGFGH 60 GNSVLDPLNE RVNDRPIEAG VGYLEDLGGV IQEDLSQNVV CEAPVSDAIR VQDLDNSRVV 120 GLTHQGNVGT SLPVPKSLGV VLKSGVMSLR KSKPKNMGSK VLPEGCSPLG LPCCIPANLE 180 GINSKVFGKS LFEVGSSSKV NDFDCDKEDV LVFGEEVCVT KADASRRGKS KPLFDVHRPL 240 RRQFLGERAK EERGEEERGG EDVVNSHHDS LKVLPLLAPS NSNDIGVIKE GGVSAAMFKE 300 DGVPIPNVLD DITVGGTAND LFSFNDGGPL GPLVPNFNNE ECVLVPSILN GVSSLNDDID 360 LNGLNEELVE FSPHKYVVDK CHVLEEGTPR LAMLDGCSLV DRGVSSPPNG LLSPPLNKDQ 420 LLHSGGVPGS SNVLGFLLLD HALSSEAVCS VGVSCDGLNA DRAKVNAQHT LLDVQPCSLD 480 VSVNAGTMRL SNGMACGFVK DKKQKLSKKD KKKKSLIEWK NFCIDLGDVL VISNPIQMEQ 540 QRSDAVKSMV YEANARVRDP VYGCVGAISS LQQQVDVLQT QLALAQAEVV HMKMHQAITL 600 LDHDQPPVPI ASNSSSQTKS FFAMDIVVDQ ANMGESLWSC

Sequence ? help Back to Top

Protein Sequence Length: 640 aa Download sequence

MAPLPSTVFP LPAASPSLLK PHAGKKNLSS FSPILNAYKA SSSRGVVARG SSTKSFGFGH  60
GNSVLDPLNE RVNDRPIEAG VGYLEDLGGV IQEDLSQNVV CEAPVSDAIR VQDLDNSRVV  120
GLTHQGNVGT SLPVPKSLGV VLKSGVMSLR KSKPKNMGSK VLPEGCSPLG LPCCIPANLE  180
GINSKVFGKS LFEVGSSSKV NDFDCDKEDV LVFGEEVCVT KADASRRGKS KPLFDVHRPL  240
RRQFLGERAK EERGEEERGG EDVVNSHHDS LKVLPLLAPS NSNDIGVIKE GGVSAAMFKE  300
DGVPIPNVLD DITVGGTAND LFSFNDGGPL GPLVPNFNNE ECVLVPSILN GVSSLNDDID  360
LNGLNEELVE FSPHKYVVDK CHVLEEGTPR LAMLDGCSLV DRGVSSPPNG LLSPPLNKDQ  420
LLHSGGVPGS SNVLGFLLLD HALSSEAVCS VGVSCDGLNA DRAKVNAQHT LLDVQPCSLD  480
VSVNAGTMRL SNGMACGFVK DKKQKLSKKD KKKKSLIEWK NFCIDLGDVL VISNPIQMEQ  540
QRSDAVKSMV YEANARVRDP VYGCVGAISS LQQQVDVLQT QLALAQAEVV HMKMHQAITL  600
LDHDQPPVPI ASNSSSQTKS FFAMDIVVDQ ANMGESLWSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31320.1	1e-16	LBD family protein

Link Out ? help Back to Top
Ensembl	OIW21128