PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW21100

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

CO-like

Protein Properties

Length: 412aa MW: 46209.8 Da PI: 5.6942

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW21100	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.9	3.6e-07	16	61	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 +r C + + ++++fC ++ +lC+ C + H+ H++v+l OIW21100 16 ARACHSCLRRRARWFCAADDAFLCHGCDSLVHSAnqlanrHERVKL 61 578*****************************66889999998875 PP
2	CCT	67.9	2.7e-23	355	397	1	43
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 Rea+++RY+eKr+tR+F+KkirYe+RK +Ae+RpR+KGrFvk+ OIW21100 355 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 397 9****************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MITDMKAASA LAAKTARACH SCLRRRARWF CAADDAFLCH GCDSLVHSAN QLANRHERVK 60 LQTASNKVAT KAQAWHSGFT RKARTPRNNK HLVLQQRLKG KVLFDNSSTN VLPVVPELGG 120 EEEQVFDDEE SEEQMLCRVP VFEPFDADEF CNIYNNEVSM KNDAANDETA CDLDSFSEFL 180 ASDMNLADFA ADVESLLGTS EVFDCKEEEE INGVGVKGAI VKVKDEELDE DTACHLDSVF 240 DMTNEAFDWN IDSVLSTAPA ATPEDVEKVV VSVAVPATKV ETKRDINLRL KLNYEEVIAT 300 WASQGCPWTT GNPPKFNSDE CWLDLLGSSS GVDAQCSSYA EVRRSLRGHH ADGGREARVS 360 RYREKRRTRL FSKKIRYEVR KLNAEKRPRM KGRFVKRTCF FGGANNAFEP YH

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MITDMKAASA LAAKTARACH SCLRRRARWF CAADDAFLCH GCDSLVHSAN QLANRHERVK  60
LQTASNKVAT KAQAWHSGFT RKARTPRNNK HLVLQQRLKG KVLFDNSSTN VLPVVPELGG  120
EEEQVFDDEE SEEQMLCRVP VFEPFDADEF CNIYNNEVSM KNDAANDETA CDLDSFSEFL  180
ASDMNLADFA ADVESLLGTS EVFDCKEEEE INGVGVKGAI VKVKDEELDE DTACHLDSVF  240
DMTNEAFDWN IDSVLSTAPA ATPEDVEKVV VSVAVPATKV ETKRDINLRL KLNYEEVIAT  300
WASQGCPWTT GNPPKFNSDE CWLDLLGSSS GVDAQCSSYA EVRRSLRGHH ADGGREARVS  360
RYREKRRTRL FSKKIRYEVR KLNAEKRPRM KGRFVKRTCF FGGANNAFEP YH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	366	382	RRTRLFSKKIRYEVRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25440.1	1e-72	CO-like family protein

Link Out ? help Back to Top
Ensembl	OIW21100