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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIW21095 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | MYB | ||||||||
| Protein Properties | Length: 295aa MW: 33893.9 Da PI: 7.1497 | ||||||||
| Description | MYB family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 53.5 | 5.7e-17 | 19 | 66 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+WT eEd+ lv+++ +G g+W++ a++ g++R +k+c++rw++yl
OIW21095 19 RGPWTLEEDKMLVQYISDHGEGRWNLLAKRSGLKRIGKSCRLRWLNYL 66
89********************************************97 PP
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| 2 | Myb_DNA-binding | 50.7 | 4e-16 | 72 | 115 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+ T eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++
OIW21095 72 RGNLTLEEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 115
7899******************.*********.***********96 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 295 aa Download sequence |
MSTSKSLSNS SEDDNELRRG PWTLEEDKML VQYISDHGEG RWNLLAKRSG LKRIGKSCRL 60 RWLNYLKPDV KRGNLTLEEQ LLILELHSRW GNRWSKIAQH LPGRTDNEIK NYWRTKIQKQ 120 ARCLKIDTYS REFQEIIRHL WIPKLLQKAK ESSSSMSIQN QSIPIPLGSG PQYSAIPTQI 180 PWQGPCINEA TGPNYLDQHA QNSDSEHNNG SCISFSESAN ISKVSNLLGY TKNQFYGLGT 240 NDFGTLTYDE YGVNNNAYEM DAFNITTTIG DCHMVESNWV NNDFACRTWS MDELF |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G25340.1 | 9e-64 | MYB family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIW21095 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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