PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW21024 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | LBD | ||||||||
Protein Properties | Length: 187aa MW: 20917.7 Da PI: 6.2529 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 141.9 | 2e-44 | 11 | 109 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+C +dC++apyfp e+++kfanvhk+FGasnv+kll++l +++reda++sl++eAear+rdPvyG+vgvi+ lq+q+++l++el+++++ OIW21024 11 PCAACKYLRRRCIPDCIFAPYFPPEERQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAFEAEARVRDPVYGCVGVITFLQRQVQRLQKELDVVNA 109 7*********************************************************************************************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence |
MASSSSSYAS PCAACKYLRR RCIPDCIFAP YFPPEERQKF ANVHKIFGAS NVTKLLNELL 60 PHQREDAVNS LAFEAEARVR DPVYGCVGVI TFLQRQVQRL QKELDVVNAD LLRYASNEIS 120 PLPASLAIPP LTQVQQIHQG NQFGAKFRNE ESEFCRQPPM TYSFPYSLPW SDTSLEDINE 180 GGGGGNM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63090.2 | 9e-62 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW21024 |