PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW21013

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 429aa MW: 48163.4 Da PI: 6.5829

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW21013	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.8	1.8e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l ++++G g+W++ +++ g+ R++k+c++rw +yl OIW21013 14 KGPWTPEEDQKLMAHIEEYGHGSWRALPAKAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	50.9	3.6e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia+ ++ +Rt++++k++w+++l OIW21013 67 RGKFSLQEEQTIIQLHALLGNR-WSAIAAQLP-KRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 429 aa Download sequence
MGRSPCCEKV GLKKGPWTPE EDQKLMAHIE EYGHGSWRAL PAKAGLQRCG KSCRLRWTNY 60 LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIAAQLPKRT DNEIKNYWNT HLKKRLTKMG 120 IDPTTHKPKI DALGGSGACQ TKDVANLSHM AQWESARLEA EARLVRESKL QLGSCSNNTQ 180 PTRLVLNKIT AQPSLPPCLD VLKAWQSSWL KPHQQITSPT TTKPNNDNKM YQHSMYAMML 240 CTDHDNLESP TSTLNFPGTT LPISTTTTVA ILNENLLPLT TTTKNTPTTM EEVESWRYLN 300 LTKQNNNNTI EEELLGENKI MMESNTLSTL QDDDIMVTME AFRTSSGYDN IIVPTVLSNT 360 VMEGLSSTNA MVYDSNNDNL GAENEENMGI MNGDGSIYNV NLEENNNHKH YWNSILNLVN 420 DSMSGSSVF

Sequence ? help Back to Top

Protein Sequence Length: 429 aa Download sequence

MGRSPCCEKV GLKKGPWTPE EDQKLMAHIE EYGHGSWRAL PAKAGLQRCG KSCRLRWTNY  60
LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIAAQLPKRT DNEIKNYWNT HLKKRLTKMG  120
IDPTTHKPKI DALGGSGACQ TKDVANLSHM AQWESARLEA EARLVRESKL QLGSCSNNTQ  180
PTRLVLNKIT AQPSLPPCLD VLKAWQSSWL KPHQQITSPT TTKPNNDNKM YQHSMYAMML  240
CTDHDNLESP TSTLNFPGTT LPISTTTTVA ILNENLLPLT TTTKNTPTTM EEVESWRYLN  300
LTKQNNNNTI EEELLGENKI MMESNTLSTL QDDDIMVTME AFRTSSGYDN IIVPTVLSNT  360
VMEGLSSTNA MVYDSNNDNL GAENEENMGI MNGDGSIYNV NLEENNNHKH YWNSILNLVN  420
DSMSGSSVF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	1e-101	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW21013