PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW21012
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family MYB
Protein Properties Length: 447aa    MW: 50187.6 Da    PI: 6.2356
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW21012genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.13e-16122167147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg W + Ed +l+++v+++G+ +W++Ia+++  gR++k+c++rw++ 
         OIW21012 122 RGHWRPAEDSKLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 167
                      899*****************************.***********996 PP
2Myb_DNA-binding55.21.6e-17174217146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      r ++T+eE+++l +a++ +G++ W+ Iar ++ gRt++ +k++w+ 
         OIW21012 174 RRAFTEEEEDRLMQAHRIYGNK-WAMIARLFP-GRTDNAVKNHWHV 217
                      678*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 447 aa     Download sequence    
MKASALYSSQ ENTNTNSSSY SSSLSPSMGM VYADMGTLSL CPNYGVAGSS WGFPFMRECN  60
IGREFEEQRN ISDVVMEGKD SDCSDGVGEN SEKININEEN PNENHVSGKE VDTSGQSKLC  120
ARGHWRPAED SKLKELVALY GPQNWNLIAE KLEGRSGKSC RLRWFNQLDP RINRRAFTEE  180
EEDRLMQAHR IYGNKWAMIA RLFPGRTDNA VKNHWHVIMA RKYREQSSAY RRRRLNQSVH  240
RRMDEDTTNF VSKDTIATGI EPPPPYCLNL PNNLATFPYA SSSFHGGCGG GVEFGLNGST  300
HMIGERDQAM ISSSKQAPPI HFGFYAQHTP IEPLPGARSN DIMGEYISQT KHRDKPYDTE  360
PSQLQPSGFY PHYNTYLMPM QYHQNYNNFY SLTSNSTAEA MLGNELSLSS VAEQHKDNEL  420
VLNSDPSSDA IHQPPFIDFL GVGATTT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1230235YRRRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26780.12e-76MYB family protein