PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW20956

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

ARF

Protein Properties

Length: 611aa MW: 69572.9 Da PI: 8.2801

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW20956	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	63.1	4.4e-20	60	160	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 f+ +lt sd++++g +++p++ +ee + +++e ++l+ +d++ +W++++i+r+++++++lt+GW+ Fv+a++L ++D+v+F ++++ +l++ OIW20956 60 FCNTLTASDTSTHGGFSVPRRAVEEVfppldfsQ-QPPE-QELIARDLHAVEWKLRHIFRGQPKHHLLTTGWSVFVSAKRLLARDSVLFI--WNEKNQLLL 156 8899*************************844.4444.49**********************************************..888888999 PP EEE- CS B3 95 kvfr 98 +++ OIW20956 157 GIRH 160 9986 PP
2	Auxin_resp	66	1.3e-22	186	246	1	60
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrls 60 +ahaa+t+s F+v+Yn ras+seFv++++k+ ka++ ++vsvGmRf+m fete+s r+ OIW20956 186 VAHAAATNSCFTVFYNQRASPSEFVIPLSKYIKAVYhTHVSVGMRFRMLFETEESGVHRFF 246 79*******************************97899*************999884 PP
3	Auxin_resp	105.7	5.5e-35	324	406	1	82
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 +ahaa+t+s F+v+Yn ras+seFv++++k+ ka++ ++vsvGmRf+m fete+s r++Gt++g+sdldpvrWp S+W s+ OIW20956 324 VAHAAATNSCFTVFYNQRASPSEFVIPLSKYIKAVYhTHVSVGMRFRMLFETEESGVHRYMGTITGISDLDPVRWPSSHWHSV 406 79*******************************97899**************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 611 aa Download sequence
MRKVAATTNR EIDGYIPNYP SLPPQLICQV HNIRMYADVE TYEVYAQMTL QLLTSPANYF 60 CNTLTASDTS THGGFSVPRR AVEEVFPPLD FSQQPPEQEL IARDLHAVEW KLRHIFRGQP 120 KHHLLTTGWS VFVSAKRLLA RDSVLFIWNE KNQLLLGIRH ANRPQTVMPL SVLSYDSMHI 180 GLLAAVAHAA ATNSCFTVFY NQRASPSEFV IPLSKYIKAV YHTHVSVGMR FRMLFETEES 240 GVHRFFCMRN LTNTQRQPKH HLLTTGWSVF VSAKRLLARD SVLFIWNEKN QLLLGIRHAN 300 RPQTVMPLSV LSYDSMHIGL LAAVAHAAAT NSCFTVFYNQ RASPSEFVIP LSKYIKAVYH 360 THVSVGMRFR MLFETEESGV HRYMGTITGI SDLDPVRWPS SHWHSVKLRC NVFIFCMSIC 420 VSKVSLDSSV LYTLVCRIHP ELLQNAGQID PENQTRTFVK VYKSGLVGCS LEILRFSSYH 480 ELREELAQMF GIEGKLEDPL RSGWQLVFVD RENDVLLGDD PWESFDNNVW YVKILSPEDI 540 QKMGEHAVES LAPSSGQRLN GTGAEISHRF WIGINWLPRI LRDSLERFIS AVLARSLNNG 600 IISWLSDGTF A

Sequence ? help Back to Top

Protein Sequence Length: 611 aa Download sequence

MRKVAATTNR EIDGYIPNYP SLPPQLICQV HNIRMYADVE TYEVYAQMTL QLLTSPANYF  60
CNTLTASDTS THGGFSVPRR AVEEVFPPLD FSQQPPEQEL IARDLHAVEW KLRHIFRGQP  120
KHHLLTTGWS VFVSAKRLLA RDSVLFIWNE KNQLLLGIRH ANRPQTVMPL SVLSYDSMHI  180
GLLAAVAHAA ATNSCFTVFY NQRASPSEFV IPLSKYIKAV YHTHVSVGMR FRMLFETEES  240
GVHRFFCMRN LTNTQRQPKH HLLTTGWSVF VSAKRLLARD SVLFIWNEKN QLLLGIRHAN  300
RPQTVMPLSV LSYDSMHIGL LAAVAHAAAT NSCFTVFYNQ RASPSEFVIP LSKYIKAVYH  360
THVSVGMRFR MLFETEESGV HRYMGTITGI SDLDPVRWPS SHWHSVKLRC NVFIFCMSIC  420
VSKVSLDSSV LYTLVCRIHP ELLQNAGQID PENQTRTFVK VYKSGLVGCS LEILRFSSYH  480
ELREELAQMF GIEGKLEDPL RSGWQLVFVD RENDVLLGDD PWESFDNNVW YVKILSPEDI  540
QKMGEHAVES LAPSSGQRLN GTGAEISHRF WIGINWLPRI LRDSLERFIS AVLARSLNNG  600
IISWLSDGTF A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G37020.2	1e-129	ARF family protein

Link Out ? help Back to Top
Ensembl	OIW20956