PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW20625

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

WRKY

Protein Properties

Length: 580aa MW: 63545 Da PI: 6.8976

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW20625	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	91.8	5.3e-29	315	373	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK kg+++pr+Y++Ct+ gCpv+k+v+r+aed +++++tYeg+Hnh+ OIW20625 315 TDGCQWRKYGQKIAKGNPCPRGYFKCTMIvGCPVRKQVQRCAEDRTILITTYEGTHNHP 373 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 580 aa Download sequence
MDKGFGLTLG TSSSSLSLPF FSSKQPQPQP PLKTSSKDTM FSVLGFPVNL SQPTNMEEEG 60 EQNRIVVGEV DFFSDKNKSL VPVEHDHDHI HQHVKPNIKK EMVSVDEKPH TSNLHVYTGL 120 QLLTANTGID KDDGVSSEIE DKRAARNIEL AQLQVELQHM NSENQKLKEM LNHVSFNYKA 180 LQMHLVTLMQ QQQQEPRSEN TENNVVQGKA HEEKKHGVVE VDDQVSNSYS DERTRCSTPQ 240 KDKIEATTRD YVRNANGKNE LAREESPNSE SQGWGLNNKV QKMSPPSVMD QSNTEATMRK 300 ARVSVRARSE APMITDGCQW RKYGQKIAKG NPCPRGYFKC TMIVGCPVRK QVQRCAEDRT 360 ILITTYEGTH NHPLPPAAMA MASTTSAAAS MLLSGSMTSS DGILRQNLLS RAIIPCSSNM 420 ATLSASTPFP TVTLDLTNNN TDPLQFQRAV HNPAPLSQVP FLVGQHPQNL GVATPFAQAL 480 YNQSKFSGLQ FSQDEVGSSQ LPPQAPRPCL QQQQPSLADT VSAATAVITA DPNFTAVLAA 540 AISSIMGGAH ANNNGHNSNE DNNNSNINNR TSTLSSFSGN

Sequence ? help Back to Top

Protein Sequence Length: 580 aa Download sequence

MDKGFGLTLG TSSSSLSLPF FSSKQPQPQP PLKTSSKDTM FSVLGFPVNL SQPTNMEEEG  60
EQNRIVVGEV DFFSDKNKSL VPVEHDHDHI HQHVKPNIKK EMVSVDEKPH TSNLHVYTGL  120
QLLTANTGID KDDGVSSEIE DKRAARNIEL AQLQVELQHM NSENQKLKEM LNHVSFNYKA  180
LQMHLVTLMQ QQQQEPRSEN TENNVVQGKA HEEKKHGVVE VDDQVSNSYS DERTRCSTPQ  240
KDKIEATTRD YVRNANGKNE LAREESPNSE SQGWGLNNKV QKMSPPSVMD QSNTEATMRK  300
ARVSVRARSE APMITDGCQW RKYGQKIAKG NPCPRGYFKC TMIVGCPVRK QVQRCAEDRT  360
ILITTYEGTH NHPLPPAAMA MASTTSAAAS MLLSGSMTSS DGILRQNLLS RAIIPCSSNM  420
ATLSASTPFP TVTLDLTNNN TDPLQFQRAV HNPAPLSQVP FLVGQHPQNL GVATPFAQAL  480
YNQSKFSGLQ FSQDEVGSSQ LPPQAPRPCL QQQQPSLADT VSAATAVITA DPNFTAVLAA  540
AISSIMGGAH ANNNGHNSNE DNNNSNINNR TSTLSSFSGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-114	WRKY family protein

Link Out ? help Back to Top
Ensembl	OIW20625