PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW20562 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | ARR-B | ||||||||
Protein Properties | Length: 245aa MW: 27926.8 Da PI: 6.5259 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 72.1 | 8.2e-23 | 195 | 244 | 1 | 51 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 kp+++Wt++LH+ F+ a+++L G +kA+Pk+ile+m+v++Lt+e+v+SHLQ OIW20562 195 KPKMVWTTQLHNLFMTAIKKL-GYDKAVPKSILEVMNVPSLTRENVASHLQ 244 79*******************.***************************** PP | |||||||
2 | Myb_DNA-binding | 29.7 | 1.5e-09 | 197 | 244 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwq 45 ++ WTt+++ l+ a+k+lG + +k+I + m+ +t++++ s++q OIW20562 197 KMVWTTQLHNLFMTAIKKLGYDkaVPKSILEVMNvPSLTRENVASHLQ 244 678********************************************9 PP | |||||||
3 | Response_reg | 51.3 | 6.4e-18 | 10 | 119 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEE.STTTHHHHHHHHHTTE CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvt.ahgeeedalealkaGa 94 vl+vd++++ + ++ ++l++ +y +v +a + + al++l+e + Dl+++ + m+g++G+e+ + i+ e klp+i+++ + g++e + + + OIW20562 10 VLVVDEDDSSLTIVSNILSSWDY-KVLTANSVDNALKTLREYEgfLDLVITEVHMSGIKGYEFQQCIKDEF-KLPVIMMStDAGKKEVTSNSEENKE 104 89*********************.******************99*************************99.9999999967777888888889889 PP SEEEESS--HHHHHH CS Response_reg 95 kdflsKpfdpeelvk 109 +l Kp+ ++l + OIW20562 105 ALHLLKPICADDLKD 119 999999998888865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MANEKVTLTV LVVDEDDSSL TIVSNILSSW DYKVLTANSV DNALKTLREY EGFLDLVITE 60 VHMSGIKGYE FQQCIKDEFK LPVIMMSTDA GKKEVTSNSE ENKEALHLLK PICADDLKDV 120 WKYAMAAKEK KPVIQNESSS EEESSAEKII NQDIDSSAPS TVTHEKKRKR KYNRRRSIEM 180 NNENHSEDSY RVQKKPKMVW TTQLHNLFMT AIKKLGYDKA VPKSILEVMN VPSLTRENVA 240 SHLQV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 166 | 171 | KKRKRK |
2 | 166 | 197 | KKRKRKYNRRRSIEMNNENHSEDSYRVQKKPK |
3 | 167 | 198 | KKRKRKYNRRRSIEMNNENHSEDSYRVQKKPK |
4 | 168 | 199 | KKRKRKYNRRRSIEMNNENHSEDSYRVQKKPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 8e-33 | ARR-B family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW20562 |