PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW20549
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family ARF
Protein Properties Length: 689aa    MW: 76147.8 Da    PI: 6.8452
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW20549genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B371.69.6e-23121221198
               EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
               f k+lt+sd+++ g +++p+ +ae++        +++ +   +  +d +g++W++++iyr++++r++lt+GW +Fv+ ++L +gD+vvF   + +++ l+v
  OIW20549 121 FAKTLTQSDANNGGGFSVPRYCAETIfprldfsAEPPVQ--NILAKDVHGETWKFRHIYRGTPRRHLLTTGWTNFVNYKKLVAGDSVVFL--RAENGDLCV 217
               89*****************************87555556..69999********************************************..4488889** PP

               EEE- CS
        B3  95 kvfr 98 
               +++r
  OIW20549 218 GIRR 221
               **98 PP
2Auxin_resp110.81.4e-36295378183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 
                 a++ a++k++FevvY+Prast+eF+vk++ +e+al+++++ GmRfkm fetedss++++ +Gt+++v+ +dp+ Wp S+Wr+L+
    OIW20549 295 AVTLAANKQPFEVVYYPRASTPEFCVKASLIEAALEIRWCSGMRFKMPFETEDSSRISWfMGTISSVQVADPLGWPTSPWRLLQ 378
                 67899*****************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 689 aa     Download sequence    
MITFMESKEK AKKVEKCLDP QLWHACAGGM VQMPQLNSKV YYFPQGHAEH ACGSVNFSTC  60
PKVQPFVLCR VEAIKYMADP ETDEVYAKLR LVPVNRNEVG CGFDGIGGIN GSESQDKPAS  120
FAKTLTQSDA NNGGGFSVPR YCAETIFPRL DFSAEPPVQN ILAKDVHGET WKFRHIYRGT  180
PRRHLLTTGW TNFVNYKKLV AGDSVVFLRA ENGDLCVGIR RVKKGMIGGP EASSGWNPAG  240
GTSTVPYGGL AACLSGDDVN SLMRNGNNRN GLHLNPPRSS MIGMGNVMPE AVIEAVTLAA  300
NKQPFEVVYY PRASTPEFCV KASLIEAALE IRWCSGMRFK MPFETEDSSR ISWFMGTISS  360
VQVADPLGWP TSPWRLLQVT WDEPDLLQNV RKVSPWLVEL VSSMPAIHLS PFSPPRKKLR  420
LPQHPDFPLD GHIPPPTFSG NLLLPNNNLF RYPPENSPAG MQGARQAHYG LSLPDFHLNR  480
PQSGLLPSGV PPPDYAATPM KVSTNLLLQK PGISENVSCL LSVENSTQST RKLDGVKTPS  540
QLVLFGQKIL TEQQISLSNS GDTVSPDQNG SALDHHGLQE RSSCERFPWC KDNCQETEAS  600
LEIGQCNVFM ESEDVGRTMD LSLLQSYDEL HRKLADMFCI EKFEMLNHVL YRDITGAVKH  660
IGDEPFSDFR KTARRLTIVM DSSSDNVAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30080.10.0ARF family protein