PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW20493
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family MYB
Protein Properties Length: 297aa    MW: 34373.1 Da    PI: 6.1007
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW20493genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.52.7e-172875148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT +Ed+ l++ ++ +G g+W+t ar  g++Rt+k+c++rw++yl
         OIW20493 28 RGPWTVDEDLSLINFIANHGEGRWNTLARSAGLKRTGKSCRLRWLNYL 75
                     89********************************************97 PP
2Myb_DNA-binding51.52.3e-1681124146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg  T eE++l++++++q+G++ W++Ia++++ gRt++++k++w++
         OIW20493  81 RGHITLEEQLLILELHNQWGNR-WSKIAQYLP-GRTDNEIKNYWRT 124
                      67789*****************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MAIEESMVVK GRDNNNNIGS EEEMDFRRGP WTVDEDLSLI NFIANHGEGR WNTLARSAGL  60
KRTGKSCRLR WLNYLHPDVR RGHITLEEQL LILELHNQWG NRWSKIAQYL PGRTDNEIKN  120
YWRTRVQKHA KHLKCDINSK QFKDTMRYLW MPRLVERIES AAVTATTVPT TVNKSSPTLS  180
TTTNNAYTYS NNLSKKFEVG NSSTAASSNT FETNEVSPIS DLSTDYYNDP ISGNNHNPQD  240
YYQPSEVNYD YITSPYGLFD FQAMEPNTPW IQSGDTPDNF WNVDHQFLQQ QLMNDIM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49620.11e-83MYB family protein