PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW20446 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 167aa MW: 19231.1 Da PI: 9.643 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 92.6 | 1.9e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien+snrqvt+skR+ngilKKA+E+ vLCda++++iif+s+gkl+ey+s OIW20446 9 KRIENTSNRQVTYSKRKNGILKKAKEITVLCDAQISLIIFGSSGKLHEYIS 59 79***********************************************86 PP | |||||||
2 | K-box | 78.5 | 1.7e-26 | 71 | 142 | 1 | 72 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnel 72 yq++sgk l++ak+e+l++e++++kke++++q e+Rhl Ged++sL++keL Le++Le++lk +R+k++e+ OIW20446 71 YQRASGKTLWDAKHENLSNEIDRVKKENDSMQIELRHLEGEDISSLNYKELIALENALENGLKDVRQKQMEV 142 78999*****************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence |
MGRGKIEIKR IENTSNRQVT YSKRKNGILK KAKEITVLCD AQISLIIFGS SGKLHEYISP 60 STTLIDVLDK YQRASGKTLW DAKHENLSNE IDRVKKENDS MQIELRHLEG EDISSLNYKE 120 LIALENALEN GLKDVRQKQM EVHSMFKRNV CGFFSFWINM LNKLNGI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G20240.1 | 5e-71 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW20446 |