PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW20231
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family MYB
Protein Properties Length: 281aa    MW: 32010.1 Da    PI: 8.0631
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW20231genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.73.6e-152875148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEde l + +k+ G g+W+t +++ g+ R++k+c++rw +yl
         OIW20231 28 RGPWTREEDEVLSNFIKKEGEGRWRTLPKRAGLLRCGKSCRLRWINYL 75
                     89******************************99************97 PP
2Myb_DNA-binding47.73.5e-1586126648
                      HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      ++E++l+++++++lG++ W++Ia +++ gRt++++k++w++yl
         OIW20231  86 PDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTYL 126
                      79***************.*********.*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MEAKTAINNN KEKKKIITPC CNKIGLKRGP WTREEDEVLS NFIKKEGEGR WRTLPKRAGL  60
LRCGKSCRLR WINYLRPSLK HGHIAPDEED LILRLHRLLG NRWSLIAGRI PGRTDNEIKN  120
YWNTYLSKKL ISQGIDPRTH KPLINSCSNS TITPLPNHSP KLIPLTPINH HHPIPSPHHH  180
INIFNQDFDP NITTTTTTHD YLDQHQATNA NITNDDVSKI GLVIRSNEQN LLCSNNEDHC  240
SDDDVFSSFL NSLINDDHAL SVCDNDLSPP AYGNGVYHHN E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.13e-77MYB family protein