PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW20041 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | LBD | ||||||||
Protein Properties | Length: 193aa MW: 21234.4 Da PI: 6.2233 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 136.9 | 7e-43 | 40 | 139 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +CaaCk+lrr+C+++Cvlapyfp ++p kf ++h++FGasn++k+l++lpe++r da+ss+vyeA+ar+rdPvyG++g i +lq+q+++l+++la++++e OIW20041 40 PCAACKILRRRCVEKCVLAPYFPPNDPIKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQVQLAKAQAE 139 7***********************************************************************************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MLSNSPPSSS SSPPFPSPSQ SPPSPFPPPP SPPPSVVLSP CAACKILRRR CVEKCVLAPY 60 FPPNDPIKFT IAHRVFGASN IIKFLQELPE SQRADAVSSM VYEANARIRD PVYGCAGAIC 120 QLQKQVSELQ VQLAKAQAEL VNMHCQQTNL VALICMEMTQ SQDQQLLQPQ QHIDMNCFID 180 DNSLGCSWEP LWT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07900.1 | 1e-73 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW20041 |