PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW19946
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family GRAS
Protein Properties Length: 558aa    MW: 62579.8 Da    PI: 6.7454
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW19946genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4094.3e-1251885571373
      GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
               l++lL++cA+a+s+++++  ++l+ + +  +s +gdp+qRl ay++e+L ar   s+s++y+a +++e +   s+e l+++++++e++P+lkf++++aN a
  OIW19946 188 LKQLLIDCAKALSENNTRDFDQLIVKARSSVSISGDPIQRLGAYMVEGLVARKEASGSGIYRAPRCKEPE---SKELLSYMQTLFEICPYLKFGYMAANGA 285
               689******************************************************************9...9*************************** PP

      GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgE 200
               I ea  +e+++HiiDf+isqG+QW++LlqaLa+ p+g+p++RiTg+++p s+  + + le +g+rLa + e++g+p+ef+  v      ++ + L+++pgE
  OIW19946 286 IAEACRNEDHIHIIDFQISQGTQWMTLLQALAATPSGAPHVRITGIDDPVSKyaRGDGLEIVGKRLAWMSEKFGIPVEFHG-VPVFAPGVTRDILDIRPGE 385
               *************************************************999999**************************.6778889999********* PP

      GRAS 201 alaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvace 301
               al+Vn+ lqlh++ desv+l+++rd +L+lvkslsPkv ++veqe+++n+++F++rf+e+l+yy a+f+s++++lpr s+eri+vE+++l+r+ivn++ace
  OIW19946 386 ALVVNFPLQLHHIADESVDLSNPRDGLLRLVKSLSPKVTTLVEQESNTNTTPFFNRFIETLDYYLAIFESIDVTLPRSSNERINVEQHCLARDIVNIIACE 486
               ***************************************************************************************************** PP

      GRAS 302 gaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
               g+er+er e ++kW++rl++aGF + pls+++++ +++ll  ++ + y++ e++ +l+lgWk+r+L+s+SaW
  OIW19946 487 GKERIERPELFGKWKSRLTMAGFCQSPLSSYVNSVIRSLLGCYS-EHYTLVEKDRALLLGWKNRNLISASAW 557
               ****************************************9998.66************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 558 aa     Download sequence    
MNSQKIFSYN LTSAGLPNMS SFPTIPSVPN RLFESLKFDV ENSHNSPFST YLDIDTLSAL  60
SGSPEQHSPG DSIKDSLQLY SSRGPLLQNA NCNQKIRHTL LELETALMAP DDDEITRSDT  120
SVADSRRTTT SAQRLYRSWS HEHQRSQYIR SRPSYVTSCR QSSEVEHAAK RQKSMEEVQL  180
QGFPSSNLKQ LLIDCAKALS ENNTRDFDQL IVKARSSVSI SGDPIQRLGA YMVEGLVARK  240
EASGSGIYRA PRCKEPESKE LLSYMQTLFE ICPYLKFGYM AANGAIAEAC RNEDHIHIID  300
FQISQGTQWM TLLQALAATP SGAPHVRITG IDDPVSKYAR GDGLEIVGKR LAWMSEKFGI  360
PVEFHGVPVF APGVTRDILD IRPGEALVVN FPLQLHHIAD ESVDLSNPRD GLLRLVKSLS  420
PKVTTLVEQE SNTNTTPFFN RFIETLDYYL AIFESIDVTL PRSSNERINV EQHCLARDIV  480
NIIACEGKER IERPELFGKW KSRLTMAGFC QSPLSSYVNS VIRSLLGCYS EHYTLVEKDR  540
ALLLGWKNRN LISASAWY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-165GRAS family protein