PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW19933
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family ARF
Protein Properties Length: 847aa    MW: 94119.8 Da    PI: 6.404
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW19933genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.71.1e-23149250199
               EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
               f+k+lt sd++++g +++ +++a+e+      ++++++ ++l+ +d++g++W++++i+r++++r++l++GW+ Fv++++L +gD ++F   + +++el+v+
  OIW19933 149 FCKTLTASDTSTHGGFSVLRRHADEClppldlSKQPPT-QELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGENEELRVG 246
               99****************************98444444.59************************************************..3488889*** PP

               EE-S CS
        B3  96 vfrk 99 
               v+r+
  OIW19933 247 VRRA 250
               *996 PP
2Auxin_resp113.91.5e-37275357183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 a+ha+ t+++F+v+Y+Pr+s++eF+v++++++++lk+++++GmRfkm+fe+e+++e+r++Gtvvg++d+++ rWp+SkWrsLk
    OIW19933 275 AWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMASLKNNYTIGMRFKMRFEGEEAPEQRFTGTVVGIEDSHSKRWPDSKWRSLK 357
                 79*******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 847 aa     Download sequence    
MATSEIVMKG NCLSHNNDGC GGGSEGQNGN LTSSKASDAE AALYRELWHA CAGPLVTVPR  60
EGELVFYFPQ GHIEQVEAST NQVADQHMPV YDLPSKILCR VINVQLKAEP DTDEVFAQLT  120
LLPESNQDEN AVEKEPPLPP LARFHVHSFC KTLTASDTST HGGFSVLRRH ADECLPPLDL  180
SKQPPTQELV AKDLHGNEWR FRHIFRGQPR RHLLQSGWSV FVSSKRLVAG DAFIFLRGEN  240
EELRVGVRRA MKHQGNVPSS VISSHSMLLG VLATAWHAIL TGTIFTVYYK PRTSPAEFIV  300
PYDQYMASLK NNYTIGMRFK MRFEGEEAPE QRFTGTVVGI EDSHSKRWPD SKWRSLKVRW  360
DETSNIPRPD RVSPWKVEPA LAPPALNPLP MPRPKKPRSN AIPSSPDSSV LTRQASSKAS  420
EDPLPINGFP RVLQGQEFST LRGNFAESNK SDTAVRSVAW PPVEDEKIDV STSRKYGSEN  480
WMSMGRHEPT YSDLLSGFGA GGDPSHPSLV YQTGHVAIPE RMHSLNHEAK LHVHHPWPVM  540
PGSLSLKLMD SNLKESANVD TTYQVRGNLS YSAYGEYPMF CHGHKVEHLH GNLMLPPPST  600
QYESPRSREL MSTPMSVKTS EAMTLKDGDC KLFGISLRSS PVAQEPSALQ RIGTSEPNGQ  660
MYLTSHQQQN SENDQKSENL KSSRPSDGLV AADDHEKSKD VQAKLLSGSA RSCTKVHKMG  720
IALGRSVDLT KYSDYYGLIA ELDRLFEFGG ELMSANKDWL IVYTDNEGDM MLVGDDPWQE  780
FCAIVRKIYI YPKEEIQKMS PGTLSSKYED IQSASEGADA NEVEGADANE VKGQMNQKLN  840
SENGFDT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein