PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW19712

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

TCP

Protein Properties

Length: 388aa MW: 44354.8 Da PI: 8.2698

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW19712	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	134	1.4e-41	120	262	3	133
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..........ssssaseceaesssssasnsssg.kaak 92 k+drhski T++g+RdRR+Rls+++a+rfF Lqd+LGfdk+skt++WLl+qak +ik+l++ s+ss sec++++ss + + s + ++ k OIW19712 120 SKRDRHSKINTAKGLRDRRMRLSLLVAKRFFSLQDMLGFDKASKTVDWLLNQAKVEIKQLAREknmhhhhhvnSASSTSECTEAMSSLDEIAVSGNqEQVK 220 69***********************************************************88888887766666677844443333332222234444 PP TCP 93 saa.kskksqksaasalnlakesrakarararertrekmrik 133 a+ ++ + +++++ ++ kesr+kar+rarertr+km+++ OIW19712 221 GATkRRRIKVCRKSAFKHVGKESREKARQRARERTRDKMMKT 262 444334444455555699999****************876 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MYSSNSSING NDLIPYPIQF YSSRPFSIES NPTSTQLETT NSCDLLLSPH PPLSYFQFPF 60 PFEDHEIFLE QQHHHDLLHH QHSLAVEIVN DVNMENTGII PDHKAGLQGT DPQVPIRKSS 120 KRDRHSKINT AKGLRDRRMR LSLLVAKRFF SLQDMLGFDK ASKTVDWLLN QAKVEIKQLA 180 REKNMHHHHH VNSASSTSEC TEAMSSLDEI AVSGNQEQVK GATKRRRIKV CRKSAFKHVG 240 KESREKARQR ARERTRDKMM KTRLLVEAHE SKKQYKEGAI NNNLNCLSSW NPFEIVKECA 300 GTQSQSVDPS LGVMNEAEER SSQGKEHFGT EDNIEHEDSL VIMSKWSPTM IFNYSLSNTG 360 ILQEHQFSEF QSMGKPWGAY NNHNISSL

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MYSSNSSING NDLIPYPIQF YSSRPFSIES NPTSTQLETT NSCDLLLSPH PPLSYFQFPF  60
PFEDHEIFLE QQHHHDLLHH QHSLAVEIVN DVNMENTGII PDHKAGLQGT DPQVPIRKSS  120
KRDRHSKINT AKGLRDRRMR LSLLVAKRFF SLQDMLGFDK ASKTVDWLLN QAKVEIKQLA  180
REKNMHHHHH VNSASSTSEC TEAMSSLDEI AVSGNQEQVK GATKRRRIKV CRKSAFKHVG  240
KESREKARQR ARERTRDKMM KTRLLVEAHE SKKQYKEGAI NNNLNCLSSW NPFEIVKECA  300
GTQSQSVDPS LGVMNEAEER SSQGKEHFGT EDNIEHEDSL VIMSKWSPTM IFNYSLSNTG  360
ILQEHQFSEF QSMGKPWGAY NNHNISSL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	224	228	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18550.2	4e-31	TCP family protein

Link Out ? help Back to Top
Ensembl	OIW19712