PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW19668

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

TCP

Protein Properties

Length: 383aa MW: 42568.3 Da PI: 9.7299

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW19668	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	95	1.5e-29	53	175	3	115
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsssg............. 88 g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+LG+ ++sk i+WL++++k i++l+ ++ ++ +++ ++++s + OIW19668 53 GGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWLIEASKLDIDKLPPLQIPHGFPQfhHQQTLLPYQHHESTPyhhhhhfslggfy 153 79*************************************************************55554222322222222222222224433344444444 PP TCP 89 ....kaaksaakskksqksaasalnlakesr 115 + k+ +++nl +sr OIW19668 154 danlS---------TIMKDGGNHQNLLPKSR 175 33331.........33333333333333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MIENSSKGYE AKREGDTTNN EKLSMAPSTT STSSRQWAAF RNPRIVRVSR ALGGKDRHSK 60 VCTIRGLRDR RIRLSVPTAI QLYDLQDRLG LSQPSKVIDW LIEASKLDID KLPPLQIPHG 120 FPQFHHQQTL LPYQHHESTP YHHHHHFSLG GFYDANLSTI MKDGGNHQNL LPKSRLNWDL 180 DSEHSRMKGK EAESVMSNIS QKGKWIKTGS EQENQDGIDG YNRQKVFPGL LNNAMAYDSY 240 HSEPSSLSLS QFGGHGSLFP SHVDPHQNSG SGSVQFSSSN VAVPSGSQLL FSPSSATPSL 300 FTPYAPFMAN SSVDNDPRQF NHVQILSSSS NNSQVMQPHP LIQSFHSLSS PLRRLPLPFN 360 SKLLDSDNNN NRSQPNKGSG SPS

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MIENSSKGYE AKREGDTTNN EKLSMAPSTT STSSRQWAAF RNPRIVRVSR ALGGKDRHSK  60
VCTIRGLRDR RIRLSVPTAI QLYDLQDRLG LSQPSKVIDW LIEASKLDID KLPPLQIPHG  120
FPQFHHQQTL LPYQHHESTP YHHHHHFSLG GFYDANLSTI MKDGGNHQNL LPKSRLNWDL  180
DSEHSRMKGK EAESVMSNIS QKGKWIKTGS EQENQDGIDG YNRQKVFPGL LNNAMAYDSY  240
HSEPSSLSLS QFGGHGSLFP SHVDPHQNSG SGSVQFSSSN VAVPSGSQLL FSPSSATPSL  300
FTPYAPFMAN SSVDNDPRQF NHVQILSSSS NNSQVMQPHP LIQSFHSLSS PLRRLPLPFN  360
SKLLDSDNNN NRSQPNKGSG SPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	2e-55	TCP family protein

Link Out ? help Back to Top
Ensembl	OIW19668