PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW19441

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 353aa MW: 39803.4 Da PI: 7.1367

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW19441	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.1	6.2e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd l+d++++ G+g +W + ++++g++R++k+c++rw++yl OIW19441 14 KGPWSPEEDAALKDYIEKNGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	36	1.6e-11	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd ++ + G++ W+ Ia+ + gRt++++k++w++ OIW19441 69 GGFTEEEDNIICSLYISIGSR-WSIIAAQLS-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAALKDYIE KNGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FTEEEDNIIC SLYISIGSRW SIIAAQLSGR TDNDIKNYWN TRLKKKLLGR 120 HKQSNFNTKE TNGTDDNSSN SLSSSALERL QLHMQLQSLQ NPFSFYSNPS LWPKWHPSQE 180 KMIQQSLKDA SNSNTVVMQG QKYEFDKPTN IVSGFLQQDI GANMNTLKVE NPLNNNSVPF 240 ANSGNNLPMH SSSIVDQTNS MGFQQVCALQ ITEHDNILNN KITMGNYLPQ EQQNMAGFDC 300 FREMNGSNDN SNLIWWSNDS DSKSASTSSW DSSTTPVLMP EGMFHDYELG YSF

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDAALKDYIE KNGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FTEEEDNIIC SLYISIGSRW SIIAAQLSGR TDNDIKNYWN TRLKKKLLGR  120
HKQSNFNTKE TNGTDDNSSN SLSSSALERL QLHMQLQSLQ NPFSFYSNPS LWPKWHPSQE  180
KMIQQSLKDA SNSNTVVMQG QKYEFDKPTN IVSGFLQQDI GANMNTLKVE NPLNNNSVPF  240
ANSGNNLPMH SSSIVDQTNS MGFQQVCALQ ITEHDNILNN KITMGNYLPQ EQQNMAGFDC  300
FREMNGSNDN SNLIWWSNDS DSKSASTSSW DSSTTPVLMP EGMFHDYELG YSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	4e-99	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW19441