PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW19179

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

HSF

Protein Properties

Length: 486aa MW: 54599.4 Da PI: 6.0462

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW19179	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	109.4	2.6e-34	21	111	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+ye+++d+++++++sws+++nsfvv+++ efa+ +Lp+yFkh+nf+SF+RQLn+YgF+k++ e+ weF+++ F k++k+ll++i OIW19179 21 FLSKTYEMVDDSSTDDVVSWSSTKNSFVVWNPPEFARFLLPTYFKHNNFSSFIRQLNTYGFRKIHPER---------WEFANDDFLKDQKHLLKNIY 108 9******************999*************************************999.........****************** PP XXX CS HSF_DNA-bind 99 rkk 101 r+k OIW19179 109 RRK 111 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 486 aa Download sequence
MDGAPPSSSA SAGTGGGPAP FLSKTYEMVD DSSTDDVVSW SSTKNSFVVW NPPEFARFLL 60 PTYFKHNNFS SFIRQLNTYG FRKIHPERWE FANDDFLKDQ KHLLKNIYRR KPIHSHSHPP 120 GSPVDPERAA LEEEIEKLSR EKASLESNIF SFIQHKSTAK VQLEDFHQRL DGIEKRQKKL 180 LNFFEKALQN PAFVEQLSRK IESMDLSAYN KKRRLPQADH LFPVAESKFV DNHSNLRMEF 240 GNVFRQDFSD KLRLELSPSV SDMNLVSGST ESSTGDKESS PKKRSEGEPK GAQSKTTLSF 300 APETLELADT GASFTFNMDS CLSRRATAAE IPNLHSLELS SEEGDSHISC QLNLTLASST 360 LQVNRNSFSA RSPQIDCQEI GKLAESRFYA NGKESDNRVS SNQNPINEVT NSASPHEALS 420 NNQVTLAAPG RVNDVFWEQF LTERPGCSDN EEAISNYREN QYDEKDEGRS GHGISRNIQG 480 MDKLTL

Sequence ? help Back to Top

Protein Sequence Length: 486 aa Download sequence

MDGAPPSSSA SAGTGGGPAP FLSKTYEMVD DSSTDDVVSW SSTKNSFVVW NPPEFARFLL  60
PTYFKHNNFS SFIRQLNTYG FRKIHPERWE FANDDFLKDQ KHLLKNIYRR KPIHSHSHPP  120
GSPVDPERAA LEEEIEKLSR EKASLESNIF SFIQHKSTAK VQLEDFHQRL DGIEKRQKKL  180
LNFFEKALQN PAFVEQLSRK IESMDLSAYN KKRRLPQADH LFPVAESKFV DNHSNLRMEF  240
GNVFRQDFSD KLRLELSPSV SDMNLVSGST ESSTGDKESS PKKRSEGEPK GAQSKTTLSF  300
APETLELADT GASFTFNMDS CLSRRATAAE IPNLHSLELS SEEGDSHISC QLNLTLASST  360
LQVNRNSFSA RSPQIDCQEI GKLAESRFYA NGKESDNRVS SNQNPINEVT NSASPHEALS  420
NNQVTLAAPG RVNDVFWEQF LTERPGCSDN EEAISNYREN QYDEKDEGRS GHGISRNIQG  480
MDKLTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	1e-136	HSF family protein

Link Out ? help Back to Top
Ensembl	OIW19179