PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW19120
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family LBD
Protein Properties Length: 229aa    MW: 25078.6 Da    PI: 8.0962
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW19120genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260100.12.1e-312103197
    DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelal 96 
               +C++C+vlr++C+++C+l+p++     p++q +++ +v+k+FG++ +++++++++e++r+++++sl++eA+ r+ +Pv+Gavg++++++++++q+++e++l
  OIW19120   2 SCNGCRVLRKGCSESCILRPCLqwietPEAQGHATVFVAKFFGRAGLMSFISNVSETQRPALFRSLLFEACGRTVNPVNGAVGLLWNGNWHVCQAAVETVL 102
               6***********************************************************************************************99987 PP

    DUF260  97 l 97 
               +
  OIW19120 103 R 103
               6 PP

Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MSCNGCRVLR KGCSESCILR PCLQWIETPE AQGHATVFVA KFFGRAGLMS FISNVSETQR  60
PALFRSLLFE ACGRTVNPVN GAVGLLWNGN WHVCQAAVET VLRGGTLTPM AEVIRMDAHA  120
PAMDEASESE VTCTDISRIR DPNLNYRFMS SRSNCGGGGG KRKRPEAAAA DLDLRLTPIF  180
MQKVSDYWSR LENRRQGSPS MTSEESVTTV ACLESGTHGG DRKVLNLFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37540.13e-82LBD family protein