PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW19100

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

SBP

Protein Properties

Length: 373aa MW: 42617.9 Da PI: 7.8246

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW19100	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	125	3.2e-39	81	157	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC+++ls+++eyh+rh+vCe+hsk+pvvlv+g+eqrfCqqCsrfh++ efD+ krsCr+rL++hn+rrrk+q+ OIW19100 81 CLVDGCKSNLSDCREYHKRHRVCEKHSKTPVVLVRGKEQRFCQQCSRFHSVGEFDDVKRSCRKRLDGHNRRRRKPQP 157 9*************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MDWDLEEFPW DSSRLEVDKC GFELKGINKK KSEGDSVDLS LGGASNLMEN LAPDTPKELK 60 DSKTVLSKKS QSNNGLQNLF CLVDGCKSNL SDCREYHKRH RVCEKHSKTP VVLVRGKEQR 120 FCQQCSRFHS VGEFDDVKRS CRKRLDGHNR RRRKPQPSPF FMAAEKFLYN YKGPRILQFD 180 SPQTYSNPIM RNMWPTTAKT ETEAESGYDR RRLLYRDDNH KQGNELFIWQ ESGLKANNGN 240 EVMLRTPIYQ QTYGANAVPA SRKGSRKPYS DSKLESFESS CALYLLSTLQ TQSSELSLVQ 300 SSITCPIQSS SGSVNLDAMD EYSCTERVMN KPTSPVFVRD AVEADLQCNG MLQIGHDELV 360 KNEDSMMFPS FWE

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MDWDLEEFPW DSSRLEVDKC GFELKGINKK KSEGDSVDLS LGGASNLMEN LAPDTPKELK  60
DSKTVLSKKS QSNNGLQNLF CLVDGCKSNL SDCREYHKRH RVCEKHSKTP VVLVRGKEQR  120
FCQQCSRFHS VGEFDDVKRS CRKRLDGHNR RRRKPQPSPF FMAAEKFLYN YKGPRILQFD  180
SPQTYSNPIM RNMWPTTAKT ETEAESGYDR RRLLYRDDNH KQGNELFIWQ ESGLKANNGN  240
EVMLRTPIYQ QTYGANAVPA SRKGSRKPYS DSKLESFESS CALYLLSTLQ TQSSELSLVQ  300
SSITCPIQSS SGSVNLDAMD EYSCTERVMN KPTSPVFVRD AVEADLQCNG MLQIGHDELV  360
KNEDSMMFPS FWE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	138	155	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	2e-42	SBP family protein

Link Out ? help Back to Top
Ensembl	OIW19100