PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW18921

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

BBR-BPC

Protein Properties

Length: 337aa MW: 37387 Da PI: 10.0096

Description

BBR-BPC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW18921	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GAGA_bind	276.7	1.1e-84	90	337	32	301
GAGA_bind 32 iaerdaki....rernlalsekkaavaerd.........maflqrdkalaernkalverdnkllalllvenslasalpvgvqvlsgtksidslqqlsepq 118 +++rd k+ r+ + +++ ++++++rd m++ +d +++ +++++++ +v+ vl++++ +lq+ +q OIW18921 90 VNDRDMKPflpgRDPSM-FIGANGTMHPRDcvvsdapmsMNY-VSDGWISL--------RDRFFNMPPVTPD--------NAVLPESSVPSTLQT---TQ 168 67888888888777777.888888888888766666666666.66666666........6778888885543........456666666665555...34 PP GAGA_bind 119 ledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGa 218 l d + + ek+++ + +++k++ ++kkrq+ + ++kakk++k +k +++++ +r+k kk+ +lv+ng+++D+s+lP+PvCsCtG+ OIW18921 169 LPDISRN----EKVDSVE----DSVVKKVGQPKKRQSRGVIASPKAKKPRK----PKVNSNASV--QRVKPVKKTKELVINGIDMDISGLPIPVCSCTGT 254 4443333....3333322....45677888888888888888888888888....222333333..789***************************** PP GAGA_bind 219 lrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 ++qCY+WG+GGWqSaCCtt++S+yPLP++ krrgaRiagrKmS gafkk+LekLaaeGy++ np+DL++hWA+HGtnkfvtir OIW18921 255 PQQCYRWGCGGWQSACCTTNVSIYPLPMNVKRRGARIAGRKMSLGAFKKVLEKLAAEGYNFVNPIDLRTHWARHGTNKFVTIR 337 ********************************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MDDDVLNMSN WGYYEPFKGG HLGLHLMPGM IDRDTKPVFP GRDPSMFVGA NDRDSKPFLS 60 DHDPSMFIGA NDRDSKPFLS GRDPSMFVGV NDRDMKPFLP GRDPSMFIGA NGTMHPRDCV 120 VSDAPMSMNY VSDGWISLRD RFFNMPPVTP DNAVLPESSV PSTLQTTQLP DISRNEKVDS 180 VEDSVVKKVG QPKKRQSRGV IASPKAKKPR KPKVNSNASV QRVKPVKKTK ELVINGIDMD 240 ISGLPIPVCS CTGTPQQCYR WGCGGWQSAC CTTNVSIYPL PMNVKRRGAR IAGRKMSLGA 300 FKKVLEKLAA EGYNFVNPID LRTHWARHGT NKFVTIR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01930.1	1e-85	BBR-BPC family protein

Link Out ? help Back to Top
Ensembl	OIW18921