PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW18748
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family MYB
Protein Properties Length: 287aa    MW: 32628.9 Da    PI: 8.4863
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW18748genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.98.5e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+ Ed++l++ +k +G g+W++ +++ g++R++k+c++rw++yl
         OIW18748 14 KGAWTPNEDKILIEFIKVHGEGRWRSMPKRAGLKRCGKSCRLRWLNYL 61
                     79********************************************97 PP
2Myb_DNA-binding50.45.1e-1667112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ + +E++l+++++ +lG++ W++Ia +++ gRt++++k++w+++l
         OIW18748  67 RGNISLDEEDLIIRLHSLLGNR-WSLIAGRLP-GRTDNEIKNYWNNHL 112
                      788999****************.*********.*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MERSPCCSKD GLNKGAWTPN EDKILIEFIK VHGEGRWRSM PKRAGLKRCG KSCRLRWLNY  60
LRPDIKRGNI SLDEEDLIIR LHSLLGNRWS LIAGRLPGRT DNEIKNYWNN HLGKKVKDGH  120
QITTNSKSIE NPKSKPSPKV KVKVTASPSH LKLDTHVVLK KTNKCSSMLI KNPLPQPSMQ  180
LHNMSKTEDA ISNNDSRSDQ IEPNDKSGFL SFINEEEKEL STDLLKDFMV RGDICSSDIL  240
NSDFSNMCDF SYSDNSNENI LSSLSDEILM DWTQSSLAHE TNVSNRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.18e-62MYB family protein