PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW18373

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 303aa MW: 34308.4 Da PI: 5.0044

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW18373	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	115.4	3.7e-36	10	109	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 aCaaCk++rrkC+++C lapyfpa+qpk f nvhklFG+sn++k+lk l+++++++am+s++ +A+ r + Pv+G+ + i +lq+q+ ++ el+++ ++ OIW18373 10 ACAACKYQRRKCTSECLLAPYFPADQPKVFLNVHKLFGVSNIVKILKILEPNQKKIAMDSIIIQANYRDKYPVHGCWEEICRLQHQIWLAEDELQTVYQQ 109 7*********************************************************************************************999887 PP

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence
MTLKGGTTQA CAACKYQRRK CTSECLLAPY FPADQPKVFL NVHKLFGVSN IVKILKILEP 60 NQKKIAMDSI IIQANYRDKY PVHGCWEEIC RLQHQIWLAE DELQTVYQQL EMFRQQNQQQ 120 QQGLTMPDYM NVASQLELGI AAPCTNALTL FNHSPQGQTY SNTMAAAAAV AAAAALPVSQ 180 QHSYSNSNSV DYNNSPYLES NDDTNMWIQQ HHHYANNNSN PIVMQSQMLT SEALAIQQET 240 VEDYEEMHPL FDAIDDRQSY IYSKEAYESS SEESLKDTRK FTEHVAENEL KNAAACFSLT 300 SVN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47870.1	9e-44	LBD family protein

Link Out ? help Back to Top
Ensembl	OIW18373