PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW18342

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 429aa MW: 48634.2 Da PI: 7.6892

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW18342	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.9	1.7e-16	149	195	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+ Ed ll+++v+q+G + W+ +a+ ++ R +kqc++rw+++l OIW18342 149 KGQWTENEDRLLIQLVEQYGVRKWAHVAQSLP-SRIGKQCRERWHNHL 195 799***************************.***********97 PP
2	Myb_DNA-binding	54.6	2.5e-17	202	243	2	45
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT eEd++l++a++ G++ W+ Ia++++ gRt++++k++w+ OIW18342 202 EVWTDEEDKILIQAHAGIGNK-WAEIAKRLP-GRTENSIKNHWN 243 68*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 429 aa Download sequence
MQDFQHIDQF HHANASSPNQ VFGVQTQNLD PFANVTCGCS KAEFDGYDGK AFVENNGSSS 60 HAHVIDNFQY EGYGLNPHRR SQMNMMASNQ SYLPFNPLET KPSNFVAPDE VSCISPAVYY 120 NRIGLNRSNK TSLTTTRSCK VRKKTNIVKG QWTENEDRLL IQLVEQYGVR KWAHVAQSLP 180 SRIGKQCRER WHNHLRPDIK KEVWTDEEDK ILIQAHAGIG NKWAEIAKRL PGRTENSIKN 240 HWNATKRRQY SKRKCCSKYP RGTILQDYIK SLNLNKNTPK DYTTQPSSNT MRKKASTIKS 300 AAAARATQPH STSQVSSNDG LVPNYEFNED PDFCFHDNMF QDGCSIDSLL DDMPCAPTTN 360 EKDFDAKVLC GSNNKKVKQV VNVDEHNHFE TEMAQEVEGN EVQKELDLVS QVTCGNISVT 420 TTECWSLAD

Sequence ? help Back to Top

Protein Sequence Length: 429 aa Download sequence

MQDFQHIDQF HHANASSPNQ VFGVQTQNLD PFANVTCGCS KAEFDGYDGK AFVENNGSSS  60
HAHVIDNFQY EGYGLNPHRR SQMNMMASNQ SYLPFNPLET KPSNFVAPDE VSCISPAVYY  120
NRIGLNRSNK TSLTTTRSCK VRKKTNIVKG QWTENEDRLL IQLVEQYGVR KWAHVAQSLP  180
SRIGKQCRER WHNHLRPDIK KEVWTDEEDK ILIQAHAGIG NKWAEIAKRL PGRTENSIKN  240
HWNATKRRQY SKRKCCSKYP RGTILQDYIK SLNLNKNTPK DYTTQPSSNT MRKKASTIKS  300
AAAARATQPH STSQVSSNDG LVPNYEFNED PDFCFHDNMF QDGCSIDSLL DDMPCAPTTN  360
EKDFDAKVLC GSNNKKVKQV VNVDEHNHFE TEMAQEVEGN EVQKELDLVS QVTCGNISVT  420
TTECWSLAD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	9e-92	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW18342